nRc.2.0.1.g46228 (Romanomermis culicivorax)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 nRc.2.0.1.g46228 T054646_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Twist2
M01718_2.00
Mus musculus
NACATATGKN

NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.870 0.808
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN

NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.870 0.788
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB

VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.870 0.788
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB

VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.870 0.788
TWIST1
M09831_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.870 0.788
TWIST1
M09832_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.870 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t46228-RA bHLH 67 118

Links

Other bHLH family TFs
Other Romanomermis culicivorax TFs

Invalid Input OrderBy

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action