SMTD_0000012501 (Schistosoma mattheei)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMTD_0000012501 T054905_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN

NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.857 0.852
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN

NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.857 0.852
ARNT
M09459_2.00
Homo sapiens
KCACGTNN

NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.857 0.852
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN

NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.857 0.852
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB

VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.857 0.852
ARNT
M09865_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.857 0.852
ARNT
M09866_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.857 0.852
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY

RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC

GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.857 0.833
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC

GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC

GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY

RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC

GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC

GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.857 0.833
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB

VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.857 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000012501-mRNA-1 bHLH 29 82

Links

Other bHLH family TFs
Other Schistosoma mattheei TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Smp_123420 Schistosoma mansoni Smp_123420 I 0.914
D915_11353 Fasciola hepatica D915_11353 I 0.914
A_03374 Schistosoma haematobium A_03374 I 0.914
T265_03519 Opisthorchis viverrini T265_03519 I 0.914
TRE_0001250901 Trichobilharzia regenti TRE_0001250901 I 0.914
SMU15010696 Schmidtea mediterranea SMU15010696 I 0.882
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I 0.882
ECPE_0000540401 Echinostoma caproni ECPE_0000540401 I 0.858
RPRC004351 Rhodnius prolixus RPRC004351 I 0.857
SINV17691 Solenopsis invicta SINV17691 I 0.857
NV11924 Nasonia vitripennis NV11924 I 0.857
TC004710 Tribolium castaneum TC004710 I 0.857
PHUM505970 Pediculus humanus PHUM505970 I 0.857
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I 0.857
ENSP00000351407 Macaca fascicularis ENSP00000351407 I 0.857
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I 0.857
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I 0.857
Afo_R007655 Aptenodytes forsteri Afo_R007655 I 0.857
tetur01g08330 Tetranychus urticae tetur01g08330 I 0.857
HMEL013329 Heliconius melpomene HMEL013329 I 0.857
GM26289 Drosophila sechellia FBgn0181143 I 0.857
GD20825 Drosophila simulans FBgn0192287 I 0.857
GL12493 Drosophila persimilis FBgn0150099 I 0.857
GI10175 Drosophila mojavensis FBgn0132941 I 0.857
BGIBMGA003472 Bombyx mori BGIBMGA003472 I 0.857
GJ10876 Drosophila virilis FBgn0198144 I 0.857
GK11420 Drosophila willistoni FBgn0213431 I 0.857
ISCW023999 Ixodes scapularis ISCW023999 I 0.857
KGM_04621 Danaus plexippus KGM_04621 I 0.857
Gfo_R011690 Geospiza fortis Gfo_R011690 I 0.857
tgo Drosophila melanogaster FBgn0264075 D 0.857
GE24803 Drosophila yakuba FBgn0241904 I 0.857
MCINX011636 Melitaea cinxia MCINX011636 I 0.857
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I 0.857
AEPI009051 Anopheles epiroticus AEPI009051 I 0.857
AFAF016726 Anopheles farauti AFAF016726 I 0.857
ADIR005096 Anopheles dirus ADIR005096 I 0.857
AATE014785 Anopheles atroparvus AATE014785 I 0.857
arnt.S Xenopus laevis XB-GENE-866594 I 0.857
AFUN000829 Anopheles funestus AFUN000829 I 0.857
AMEC017008 Anopheles melas AMEC017008 I 0.857
MDOA015409 Musca domestica MDOA015409 I 0.857
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I 0.857
BGLB009342 Biomphalaria glabrata BGLB009342 I 0.857
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.857
arnt Xenopus tropicalis XB-GENE-855450 I 0.857
arnt.L Xenopus laevis XB-GENE-17346408 I 0.857
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I 0.857
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I 0.857
GG17399 Drosophila erecta FBgn0109625 I 0.857
Tal_R007034 Tyto alba Tal_R007034 I 0.857
Pvit_04978 Pogona vitticeps Pvit_04978 I 0.857
CLEC002917 Cimex lectularius CLEC002917 I 0.857
CLEC012864 Cimex lectularius CLEC012864 I 0.857
LDEC004670 Leptinotarsa decemlineata LDEC004670 I 0.857
LCUP007387 Lucilia cuprina LCUP007387 I 0.857
HHAL009348-PA Halyomorpha halys HHAL009348-PA I 0.857
HHAL008564-PA Halyomorpha halys HHAL008564-PA I 0.857
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I 0.857
GH18221 Drosophila grimshawi FBgn0125689 I 0.857
ARNT Gallus gallus ENSGALG00000000751 I 0.857
ARNT Gorilla gorilla ENSGGOG00000015383 I 0.857
arnt Gasterosteus aculeatus ENSGACG00000011686 I 0.857
ARNT Homo sapiens ENSG00000143437 D 0.857
ARNT Echinops telfairi ENSETEG00000001280 I 0.857
ARNT Felis catus ENSFCAG00000003644 I 0.857
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I 0.857
ARNT Loxodonta africana ENSLAFG00000011282 I 0.857
ARNT Myotis lucifugus ENSMLUG00000003502 I 0.857
GF18433 Drosophila ananassae FBgn0095451 I 0.857
ARNT Microcebus murinus ENSMICG00000005872 I 0.857
ARNT Meleagris gallopavo ENSMGAG00000000943 I 0.857
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I 0.857
ARNT Erinaceus europaeus ENSEEUG00000007500 I 0.857
ARNT Equus caballus ENSECAG00000009602 I 0.857
ARNT Bos taurus ENSBTAG00000021037 I 0.857
ARNT Canis familiaris ENSCAFG00000012149 I 0.857
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I 0.857
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I 0.857
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.857
ARNT Anolis carolinensis ENSACAG00000011254 I 0.857
ARNT Choloepus hoffmanni ENSCHOG00000010045 I 0.857
arnt Ciona intestinalis ENSCING00000008102 I 0.857
ARNT Dasypus novemcinctus ENSDNOG00000005093 I 0.857
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I 0.857
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I 0.857
ARNT Cavia porcellus ENSCPOG00000014578 I 0.857
ARNT Callithrix jacchus ENSCJAG00000006839 I 0.857
ARNT Monodelphis domestica ENSMODG00000018814 I 0.857
ARNT Macaca mulatta ENSMMUG00000000541 I 0.857
ARNT Sus scrofa ENSSSCG00000006646 I 0.857
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I 0.857
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I 0.857
Arnt Rattus norvegicus ENSRNOG00000031174 I 0.857
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I 0.857
ARNT Taeniopygia guttata ENSTGUG00000004647 I 0.857
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I 0.857
ARNT Vicugna pacos ENSVPAG00000005439 I 0.857
GA11313 Drosophila pseudoobscura FBgn0071367 I 0.857
ARNT Tursiops truncatus ENSTTRG00000007388 I 0.857
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I 0.857
ARNT Takifugu rubripes ENSTRUG00000014504 I 0.857
ARNT Pan troglodytes ENSPTRG00000001266 I 0.857
ARNT Pteropus vampyrus ENSPVAG00000004354 I 0.857
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I 0.857
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I 0.857
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I 0.857
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I 0.857
Arnt Mus musculus ENSMUSG00000015522 D 0.857
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I 0.857
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I 0.857
ARNT Otolemur garnettii ENSOGAG00000004523 I 0.857
ARNT Ochotona princeps ENSOPRG00000010374 I 0.857
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I 0.857
ARNT Procavia capensis ENSPCAG00000008485 I 0.857
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I 0.857
ARNT Oryzias latipes ENSORLG00000010551 I 0.857
ARNT Sorex araneus ENSSARG00000005490 I 0.846
ECANG7_07095 Echinococcus canadensis ECANG7_07095 I 0.842
MCOS_0000389001 Mesocestoides corti MCOS_0000389001 I 0.840
RSKR_0000723700 Rhabditophanes kr3021 RSKR_0000723700 N 0.838