CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPER_0002141801
(
Spirometra erinaceieuropaei
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
SPER_0002141801
T055006_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe22
M01729_2.00
Mus musculus
NVCATATGGN
NCCATATGBN
PBM
Weirauch et al.(2014)
pTH5267
0.844
0.885
BHLHE22
M02804_2.00
Homo sapiens
NAVCATATGBTN
NAVCATATGBTN
SELEX
Jolma et al.(2013)
BHLHE22_1
0.844
0.885
BHLHE22
M04199_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX
0.844
0.885
BHLHE22
M04200_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX
0.844
0.885
BHLHE23
M02784_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Jolma et al.(2013)
BHLHE23_1
0.844
0.865
BHLHE23
M04108_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX
0.844
0.865
BHLHE23
M04110_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX
0.844
0.865
BHLHE23
M04109_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX
0.844
0.865
BHLHE23
M04111_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX
0.844
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPER_0002141801-mRNA-1
bHLH
90
142
RLTINARERRRMHDLNAALDELRNALPYGHSPSVRKLSKIATLLLAKNYILMQ
Links
Other
bHLH
family TFs
Other
Spirometra erinaceieuropaei
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy