TMUE_s0045001800 (Trichuris muris)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 TMUE_s0045001800 T055305_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.884 0.962
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.884 0.962
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.884 0.962
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.884 0.962
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.884 0.962
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY

RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.844 0.827
Myf6
M01742_2.00
Mus musculus
RACAGHTGH

DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.844 0.827
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY

RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.844 0.827
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.844 0.827
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV

BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.844 0.827
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY

RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.844 0.827
MYF6
M08717_2.00
Homo sapiens
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.844 0.827
Myf6
M08767_2.00
Mus musculus
CASCTGC

GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.844 0.827
MYF6
M09820_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.844 0.827
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR

YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.844 0.827
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV

BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.844 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0045001800 bHLH 272 323

Links

Other bHLH family TFs
Other Trichuris muris TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
D918_04086 Trichuris suis D918_04086 I 0.914
RPRC009735 Rhodnius prolixus RPRC009735 I 0.914
CLEC002330 Cimex lectularius CLEC002330 I 0.914
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.914
EFV52759 Trichinella spiralis EFV52759 I 0.914
D917_06339 Trichinella nativa D917_06339 I 0.914
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.914
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.914
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.914
T265_10140 Opisthorchis viverrini T265_10140 I 0.901
Smp_167400 Schistosoma mansoni Smp_167400 I 0.901
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.901
A_07871 Schistosoma haematobium A_07871 I 0.901
D915_09890 Fasciola hepatica D915_09890 I 0.901
csin100742 Clonorchis sinensis csin100742 I 0.901
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.901
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.890
GJ24474 Drosophila virilis FBgn0211554 I 0.884
GK22777 Drosophila willistoni FBgn0224749 I 0.884
GD18361 Drosophila simulans FBgn0189889 I 0.884
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.884
GF18746 Drosophila ananassae FBgn0095763 I 0.884
GE23932 Drosophila yakuba FBgn0241076 I 0.884
GH13904 Drosophila grimshawi FBgn0121380 I 0.884
GI24830 Drosophila mojavensis FBgn0147551 I 0.884
GL13832 Drosophila persimilis FBgn0151437 I 0.884
GM23547 Drosophila sechellia FBgn0178413 I 0.884
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.884
nau Drosophila melanogaster FBgn0002922 D 0.884
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.884
LCUP007809 Lucilia cuprina LCUP007809 I 0.884
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.884
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.884
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.884
NV10294 Nasonia vitripennis NV10294 I 0.884
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.884
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.884
GB55306 Apis mellifera GB55306 I 0.884
GG12413 Drosophila erecta FBgn0104701 I 0.884
CapteG36721 Capitella teleta CapteG36721 I 0.884
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.884
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.871
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.871
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I 0.866
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I 0.864
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I 0.864
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.863
TC015855 Tribolium castaneum TC015855 I 0.863
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.863
AMIN003460 Anopheles minimus AMIN003460 I 0.860
AMEM001613 Anopheles merus AMEM001613 I 0.860
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.860
AATE018889 Anopheles atroparvus AATE018889 I 0.860
ACUA006973 Anopheles culicifacies ACUA006973 I 0.860
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.860
ACHR010174 Anopheles christyi ACHR010174 I 0.860
AARA002094 Anopheles arabiensis AARA002094 I 0.860
AAEL014322 Aedes aegypti AAEL014322 I 0.860
AFAF001067 Anopheles farauti AFAF001067 I 0.860
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.860
ADAC002492 Anopheles darlingi ADAC002492 I 0.860
AEPI006062 Anopheles epiroticus AEPI006062 I 0.860
AFUN011634 Anopheles funestus AFUN011634 I 0.860
ADIR010448 Anopheles dirus ADIR010448 I 0.860
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.860
ACOM034431 Anopheles coluzzii ACOM034431 I 0.860
PHUM424120 Pediculus humanus PHUM424120 I 0.860
AALB008334 Anopheles albimanus AALB008334 I 0.860
AMAM006832 Anopheles maculatus AMAM006832 I 0.860
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.855
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.855
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.850
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.850
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.850
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.850
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.850
TsM_000079400 Taenia solium TsM_000079400 I 0.850
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.850
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.850
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.850
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.850
LotgiG99982 Lottia gigantea LotgiG99982 I 0.849
myod1 Gasterosteus aculeatus ENSGACG00000017350 I 0.846
myf5 Danio rerio ENSDARG00000007277 I 0.846
MYF5 Gallus gallus ENSGALG00000028091 I 0.846
MYF5 Monodelphis domestica ENSMODG00000020478 I 0.846
myod1 Gasterosteus aculeatus ENSGACG00000008444 I 0.846
Brh_R000054 Buceros rhinoceros Brh_R000054 I 0.846
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I 0.846
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I 0.846
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I 0.846
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I 0.846
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I 0.846
MYF5 Otolemur garnettii ENSOGAG00000001039 I 0.846
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I 0.846
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I 0.846
myod1 Oryzias latipes ENSORLG00000000694 I 0.846
myf5 Oryzias latipes ENSORLG00000016257 I 0.846
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I 0.846
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I 0.846
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I 0.846
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I 0.846
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I 0.846
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I 0.846
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I 0.846
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I 0.846
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I 0.846
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I 0.846
MYF6 Canis familiaris ENSCAFG00000005805 I 0.844
ABU42126 Xenopus laevis ABU42126 I 0.844
MYF6 Callithrix jacchus ENSCJAG00000019339 I 0.844
AAO11649 Xenopus laevis AAO11649 I 0.844
myf6 Xenopus tropicalis XB-GENE-998203 I 0.844
MYF6 Bos taurus ENSBTAG00000014003 I 0.844
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I 0.844
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I 0.844
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I 0.844
MYF6 Anolis carolinensis ENSACAG00000022851 I 0.844
myf6.S Xenopus laevis XB-GENE-998208 I 0.844
myf6.L Xenopus laevis XB-GENE-6252334 I 0.844
Afo_R014067 Aptenodytes forsteri Afo_R014067 I 0.844
MYF6 Pteropus vampyrus ENSPVAG00000003335 I 0.844
Myf6 Rattus norvegicus ENSRNOG00000004878 I 0.844
MYF6 Pan troglodytes ENSPTRG00000005260 I 0.844
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I 0.844
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I 0.844
MYF6 Sorex araneus ENSSARG00000008211 I 0.844
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I 0.844
myf6 Takifugu rubripes ENSTRUG00000010842 I 0.844
MYF6 Taeniopygia guttata ENSTGUG00000007751 I 0.844
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I 0.844
MYF6 Sus scrofa ENSSSCG00000026533 I 0.844
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I 0.844
MYF6 Procavia capensis ENSPCAG00000001692 I 0.844
MYF6 Ornithorhynchus anatinus ENSOANG00000004854 I 0.844
ENSNLEG00000005194 Nomascus leucogenys ENSNLEG00000005194 I 0.844
Myf6 Mus musculus ENSMUSG00000035923 D 0.844
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I 0.844
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I 0.844
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I 0.844
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I 0.844
myf6 Oryzias latipes ENSORLG00000016261 I 0.844
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I 0.844
MYF6 Otolemur garnettii ENSOGAG00000001038 I 0.844
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I 0.844
MYF6 Tursiops truncatus ENSTTRG00000014689 I 0.844
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I 0.844
ENSP00000228641 Macaca fascicularis ENSP00000228641 I 0.844
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I 0.844
Aan_R006110 Calypte anna Aan_R006110 I 0.844
MYF6 Felis catus ENSFCAG00000015010 I 0.844
Gfo_R003967 Geospiza fortis Gfo_R003967 I 0.844
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I 0.844
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I 0.844
MYF6 Equus caballus ENSECAG00000018919 I 0.844
Pvit_10244 Pogona vitticeps Pvit_10244 I 0.844
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I 0.844
MYF6 Homo sapiens ENSG00000111046 D 0.844
myf6 Gasterosteus aculeatus ENSGACG00000020008 I 0.844
MYF6 Macaca mulatta ENSMMUG00000011667 I 0.844
MYF6 Monodelphis domestica ENSMODG00000020477 I 0.844
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I 0.844
MYF6 Vicugna pacos ENSVPAG00000001926 I 0.844
MYF6 Myotis lucifugus ENSMLUG00000004940 I 0.844
MYF6 Microcebus murinus ENSMICG00000004274 I 0.844
MYF6 Gallus gallus ENSGALG00000010936 I 0.844
MYF6 Gorilla gorilla ENSGGOG00000004369 I 0.844
MYF6 Loxodonta africana ENSLAFG00000016476 I 0.844
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I 0.844
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I 0.844
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I 0.841