TRE_0000306101 (Trichobilharzia regenti)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 TRE_0000306101 T055325_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.871 0.885
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.871 0.885
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.871 0.885
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.871 0.885
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.871 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0000306101-mRNA-1 bHLH 847 898

Links

Other bHLH family TFs
Other Trichobilharzia regenti TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.914
A_07871 Schistosoma haematobium A_07871 I 0.914
T265_10140 Opisthorchis viverrini T265_10140 I 0.914
D915_09890 Fasciola hepatica D915_09890 I 0.914
Smp_167400 Schistosoma mansoni Smp_167400 I 0.914
csin100742 Clonorchis sinensis csin100742 I 0.914
CLEC002330 Cimex lectularius CLEC002330 I 0.901
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.901
D917_06339 Trichinella nativa D917_06339 I 0.901
D918_04086 Trichuris suis D918_04086 I 0.901
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.901
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.901
RPRC009735 Rhodnius prolixus RPRC009735 I 0.901
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.901
EFV52759 Trichinella spiralis EFV52759 I 0.901
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.901
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.884
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.884
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.877
GE23932 Drosophila yakuba FBgn0241076 I 0.871
LCUP007809 Lucilia cuprina LCUP007809 I 0.871
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.871
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.871
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.871
nau Drosophila melanogaster FBgn0002922 D 0.871
GI24830 Drosophila mojavensis FBgn0147551 I 0.871
GK22777 Drosophila willistoni FBgn0224749 I 0.871
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.871
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.871
CapteG36721 Capitella teleta CapteG36721 I 0.871
GH13904 Drosophila grimshawi FBgn0121380 I 0.871
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.871
GL13832 Drosophila persimilis FBgn0151437 I 0.871
GD18361 Drosophila simulans FBgn0189889 I 0.871
GM23547 Drosophila sechellia FBgn0178413 I 0.871
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.871
NV10294 Nasonia vitripennis NV10294 I 0.871
GB55306 Apis mellifera GB55306 I 0.871
GF18746 Drosophila ananassae FBgn0095763 I 0.871
GJ24474 Drosophila virilis FBgn0211554 I 0.871
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.871
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.871
GG12413 Drosophila erecta FBgn0104701 I 0.871
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.863
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.863
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.863
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.863
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.863
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.863
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.863
TsM_000079400 Taenia solium TsM_000079400 I 0.863
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.863
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.863
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I 0.853
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I 0.851
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I 0.851
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.850
TC015855 Tribolium castaneum TC015855 I 0.850
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.850
AAEL014322 Aedes aegypti AAEL014322 I 0.847
ADAC002492 Anopheles darlingi ADAC002492 I 0.847
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.847
AEPI006062 Anopheles epiroticus AEPI006062 I 0.847
AATE018889 Anopheles atroparvus AATE018889 I 0.847
ACHR010174 Anopheles christyi ACHR010174 I 0.847
ACOM034431 Anopheles coluzzii ACOM034431 I 0.847
AARA002094 Anopheles arabiensis AARA002094 I 0.847
AALB008334 Anopheles albimanus AALB008334 I 0.847
PHUM424120 Pediculus humanus PHUM424120 I 0.847
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.847
ACUA006973 Anopheles culicifacies ACUA006973 I 0.847
ADIR010448 Anopheles dirus ADIR010448 I 0.847
AMIN003460 Anopheles minimus AMIN003460 I 0.847
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.847
AMEM001613 Anopheles merus AMEM001613 I 0.847
AMAM006832 Anopheles maculatus AMAM006832 I 0.847
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.847
AFUN011634 Anopheles funestus AFUN011634 I 0.847
AFAF001067 Anopheles farauti AFAF001067 I 0.847
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.842
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.842