CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene12958-v1.0-hybrid
(
Fragaria vesca
)
bHLH,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
PF00505 (HMG_box)
IPR001092
IPR000910
gene12958-v1.0-hybrid
T055445_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna12958.1-v1.0-hybrid
Sox
14
68
VLFTFIDEFRLKYWEEHPNQSAAARKAAVEKWKSMSKSEKASYTAMVRKRSSSWT
mrna12958.1-v1.0-hybrid
bHLH
303
355
DPHSIAERLRREKIADRMKNLQELVPKSNKARSTFTDKASMLDEIIEYVKFLQ
Links
Other
bHLH,Sox
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found