GG19638 (Drosophila erecta)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 FBgn0111840 T055666_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
brk
M03628_2.00
Drosophila melanogaster
WRGCGCCGGCGCYW

WRGCGCCGGCGCYW
SELEX
Nitta et al.(2015)
brk_1
1.000 1.000
brk
M03629_2.00
Drosophila melanogaster
WRGCGCCAGGCGCYW

WRGCGCCTGGCGCYW
SELEX
Nitta et al.(2015)
brk_2
1.000 1.000
brk
M03630_2.00
Drosophila melanogaster
WRGCGCCATGGCGCYW

WRGCGCCATGGCGCYW
SELEX
Nitta et al.(2015)
brk_3
1.000 1.000
brk
M06013_2.00
Drosophila melanogaster
RGCGCCRS

SYGGCGCY
B1H
Zhu et al.(2011)
brk_FlyReg_FBgn0024250
1.000 1.000
brk
M07539_2.00
Drosophila melanogaster
RGCGCCRS

SYGGCGCY
DNaseI footprinting
Mathelier et al.(2014)
MA0213.1
1.000 1.000
brk
M09658_2.00
Drosophila melanogaster
BHRRCGCCABBHVV

BBDVVTGGCGYYDV
Misc
Kulakovskiy et al.(2009)
brk
1.000 1.000
brk
M09903_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$BRK_Q6
1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0138184 Brinker 43 100

Links

Other Brinker family TFs
Other Drosophila erecta TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GD16839 Drosophila simulans FBgn0188424 I 1.000
brk Drosophila melanogaster FBgn0024250 D 1.000
GE15708 Drosophila yakuba FBgn0233275 I 1.000
GM17513 Drosophila sechellia FBgn0172421 I 1.000
GL14695 Drosophila persimilis FBgn0152299 I 0.983
brk Drosophila pseudoobscura FBgn0081927 I 0.983
brk Drosophila ananassae FBgn0098143 I 0.983
brk Drosophila willistoni FBgn0218144 I 0.966
MDOA006277 Musca domestica MDOA006277 I 0.966
GH24261 Drosophila grimshawi FBgn0131717 I 0.966
GJ14850 Drosophila virilis FBgn0202054 I 0.966
GI15944 Drosophila mojavensis FBgn0138693 I 0.948
ACYPI47548 Acyrthosiphon pisum ACYPI47548 I 0.759
MESCA001664 Megaselia scalaris MESCA001664 I 0.741
KGM_03400 Danaus plexippus KGM_03400 I 0.714
BGIBMGA007697 Bombyx mori BGIBMGA007697 I 0.707