CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGOC_0000345301
(
Cylicostephanus goldi
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
CGOC_0000345301
T055854_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y44A6D.3
M00590_2.00
Caenorhabditis elegans
NYGCGCRRN
NYYGCGCRN
PBM
Narasimhan et al.(2015)
pTH10696
0.745
0.745
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CGOC_0000345301-mRNA-1
Brinker
29
75
TLKQYSIDEKLEIIEFAKGNGNRAAGREYNVAESSIREWRKNEEKLR
Links
Other
Brinker
family TFs
Other
Cylicostephanus goldi
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy