GBF2 (Arabidopsis lyrata)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Al_scaffold_0006_3899 T056731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN

NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.872 0.969
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.852 0.672
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.851 0.656
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN

NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.848 0.656
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.835 0.688
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.835 0.688
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD

HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.830 0.719
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD

HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.830 0.719
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.830 0.719
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.808 0.609
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.808 0.609
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.808 0.609
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.808 0.609
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.808 0.609
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.787 0.531
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.787 0.531
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.786 0.547
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.786 0.547
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV

BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.786 0.578
CPRF1_PETCR
M10066_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.784 0.594
CPRF1_PETCR
M10067_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.784 0.594
CPRF1_PETCR
M10068_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.784 0.594
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW

WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.783 0.625
EMBP1_WHEAT
M09921_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
0.783 0.625
EMBP1_WHEAT
M09922_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
0.783 0.625
CPRF3_PETCR
M10071_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_01
0.783 0.500
CPRF3_PETCR
M10072_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_Q2
0.783 0.500
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0006_3899 bZIP 260 323

Links

Other bZIP family TFs
Other Arabidopsis lyrata TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29646.m001068 Ricinus communis 29646.m001068 I 0.803
30068.m002661 Ricinus communis 30068.m002661 I 0.786
30174.m008698 Ricinus communis 30174.m008698 I 0.847
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.783
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.806
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.823
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I 0.811
BZIP68 Arabidopsis thaliana AT1G32150 D 0.786
BZIP16 Arabidopsis thaliana AT2G35530 D 0.787
GBF3 Arabidopsis thaliana AT2G46270 D 0.830
GBF2 Arabidopsis thaliana AT4G01120 D 0.872
GBF1 Arabidopsis thaliana AT4G36730 D 0.808
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.852
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.852
Bo1g005460 Brassica oleracea Bo1g005460 I 0.805
Bo3g039150 Brassica oleracea Bo3g039150 I 0.802
Bo4g010410 Brassica oleracea Bo4g010410 I 0.830
Bo4g038560 Brassica oleracea Bo4g038560 I 0.791
Bo9g003700 Brassica oleracea Bo9g003700 I 0.884
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.787
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.802
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I 0.882
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.808
Bra004550 Brassica rapa Bra004550 I 0.830
Bra005335 Brassica rapa Bra005335 I 0.807
Bra010572 Brassica rapa Bra010572 I 0.814
Bra011701 Brassica rapa Bra011701 I 0.805
Bra037382 Brassica rapa Bra037382 I 0.884
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.846
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.851
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I 0.830
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.787
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I 0.882
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.786
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.808
Carubv10001247m.g Capsella rubella Carubv10001247m.g I 0.882
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.808
Carubv10023434m.g Capsella rubella Carubv10023434m.g I 0.830
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I 0.786
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.842
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.842
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I 0.786
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.833
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.833
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.833
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.803
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.833
Ca_01293 Cicer arietinum Ca_01293 I 0.823
Ca_11455 Cicer arietinum Ca_11455 I 0.790
Ca_15839 Cicer arietinum Ca_15839 I 0.786
Ca_17787 Cicer arietinum Ca_17787 I 0.830
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.825
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.790
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.792
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I 0.844
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.789
Cla008988 Citrullus lanatus Cla008988 I 0.790
Cla014415 Citrullus lanatus Cla014415 I 0.805
Cla016502 Citrullus lanatus Cla016502 I 0.789
Cla021500 Citrullus lanatus Cla021500 I 0.824
CPRF1_PETCR Petroselinum crispum CPRF1_PETCR D 0.784
CPRF3_PETCR Petroselinum crispum CPRF3_PETCR D 0.783
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.805
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.824
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.789
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.790
EMBP1_WHEAT Triticum aestivum EMBP1_WHEAT D 0.783
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.805
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.804
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.841
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.790
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.790
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.796
F775_07803 Aegilops tauschii F775_07803 I 0.854
F775_14728 Aegilops tauschii F775_14728 I 0.783
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I 0.830
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.786
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.805
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.834
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.788
gene32022-v1.0-hybrid Fragaria vesca gene32022-v1.0-hybrid I 0.796
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.785
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.805
GLYMA03G41590 Glycine max GLYMA03G41590 I 0.857
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.850
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.838
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.790
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.851
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.823
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.805
GLYMA19G44190 Glycine max GLYMA19G44190 I 0.857
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.790
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.867
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.795
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.848
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.816
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.816
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.867
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.854
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.852
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.854
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.854
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.854
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I 0.832
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I 0.834
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.834
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.787
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.783
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.802
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.783
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.789
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.852
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.852
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.838
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.838
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.792
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.792
MDP0000138052 Malus domestica MDP0000138052 I 0.827
MDP0000185553 Malus domestica MDP0000185553 I 0.805
MDP0000231274 Malus domestica MDP0000231274 I 0.793
MDP0000239688 Malus domestica MDP0000239688 I 0.799
MDP0000286846 Malus domestica MDP0000286846 I 0.805
MDP0000493795 Malus domestica MDP0000493795 I 0.827
MDP0000545420 Malus domestica MDP0000545420 I 0.827
mgf000639m Mimulus guttatus mgf000639m I 0.794
mgf003302m Mimulus guttatus mgf003302m I 0.853
mgf005151m Mimulus guttatus mgf005151m I 0.794
mgf008605m Mimulus guttatus mgf008605m I 0.794
mgf013423m Mimulus guttatus mgf013423m I 0.853
mgf014804m Mimulus guttatus mgf014804m I 0.794
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.854
MLOC_79342 Hordeum vulgare MLOC_79342 I 0.783
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.790
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.823
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.819
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.805
OB01G34490 Oryza brachyantha OB01G34490 I 0.852
OB05G33790 Oryza brachyantha OB05G33790 I 0.852
OBART01G25300 Oryza barthii OBART01G25300 I 0.852
OBART05G26280 Oryza barthii OBART05G26280 I 0.852
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.852
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.852
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.852
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.852
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.852
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.852
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.852
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.852
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.852
OPUNC02G01690 Oryza punctata OPUNC02G01690 I 0.792
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.852
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I 0.844
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.789
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.792
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.852
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.852
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.852
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.852
OS01G0658900 Oryza sativa OS01G0658900 I 0.852
OS05G0569300 Oryza sativa OS05G0569300 I 0.852
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I 0.836
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.852
Pavir.J01411 Panicum virgatum Pavir.J01411 I 0.833
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I 0.838
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.789
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.793
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I 0.826
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.793
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.816
PK07494.1 Cannabis sativa PK07494.1 I 0.792
PK09653.1 Cannabis sativa PK09653.1 D 0.848
PK23964.1 Cannabis sativa PK23964.1 D 0.786
Pm018422 Prunus mume Pm018422 I 0.827
Pm023132 Prunus mume Pm023132 I 0.805
Pm024103 Prunus mume Pm024103 I 0.799
Pm026586 Prunus mume Pm026586 I 0.789
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I 0.786
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.830
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I 0.786
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.796
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.796
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I 0.831
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.827
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.805
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.789
PRUPE_ppa020524mg Prunus persica PRUPE_ppa020524mg I 0.799
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.852
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.851
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.819
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.790
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I 0.786
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.796
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.792
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.852
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.854
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.808
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.789
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.789
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.800
Si001929m.g Setaria italica Si001929m.g I 0.852
Si022388m.g Setaria italica Si022388m.g I 0.854
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I 0.826
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.793
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.816
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.785
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.835
TCM_000436 Theobroma cacao TCM_000436 I 0.797
TCM_005210 Theobroma cacao TCM_005210 I 0.867
TCM_016606 Theobroma cacao TCM_016606 I 0.783
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I 0.830
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.786
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.794
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.814
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I 0.884
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.854
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.854
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.854
EmBP-1 Triticum aestivum Traes_5AL_9BC38814C D 0.783
Traes_5BL_F3018E8CA Triticum aestivum Traes_5BL_F3018E8CA I 0.783
Traes_5DL_75AEE92BB Triticum aestivum Traes_5DL_75AEE92BB I 0.783
Traes_7DL_67C4287B2 Triticum aestivum Traes_7DL_67C4287B2 I 0.783
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.854
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.790
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I 0.806
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.789
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.824
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.789