BZIP60 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT1G42990 T056865_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP60
M00855_2.00
Arabidopsis thaliana
TGACGTSR

YSACGTCA
PBM
Franco-Zorrilla et al.(2014)
bZIP60
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00855_2.00 bZIP 138 198

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G42990.1 bZIP 138 198

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATBZIP60 Arabidopsis lyrata fgenesh2_kg.1__3703__AT1G42990.1 I 0.854
Bostr.12302s0013 Boechera stricta Bostr.12302s0013 I 0.854
Thhalv10004635m.g Eutrema salsugineum Thhalv10004635m.g I 0.848
Bo8g024280 Brassica oleracea Bo8g024280 I 0.847
Cagra.2795s0001 Capsella grandiflora Cagra.2795s0001 I 0.840
Carubv10009864m.g Capsella rubella Carubv10009864m.g I 0.840