CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BZIP17
(
Arabidopsis thaliana
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
AT2G40950
T056889_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP17
M01778_2.00
Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN
PBM
Weirauch et al.(2014)
pTH7221
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA1B_TOBAC
M10083_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_01
0.847
0.781
TGA1B_TOBAC
M10084_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_Q2
0.847
0.781
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01778_2.00
bZIP
51
114
EEDEKKRARLMRNRESAQLSRQRKKHYVEELEEKVRNMHSTITDLNGKISYFMAENATLRQQLG
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G40950.1
bZIP
226
289
EEDEKKRARLMRNRESAQLSRQRKKHYVEELEEKVRNMHSTITDLNGKISYFMAENATLRQQLG
Links
Other
bZIP
family TFs
Other
Arabidopsis thaliana
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy