HYH (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT3G17609 T056895_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HYH
M01132_2.00
Arabidopsis thaliana
NNWSACGTGDNN

NNHCACGTSWNN
PBM
Lambert et al.(2019)
pTH9959
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01132_2.00 bZIP 51 115

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G17609.1 bZIP 62 126
AT3G17609.2 bZIP 76 140
AT3G17609.3 bZIP 47 112
AT3G17609.4 bZIP 61 125

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action