FD (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT4G35900 T056913_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.796 0.516
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.796 0.516
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.796 0.516
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.796 0.516
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.796 0.516
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN

NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.791 0.677
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G35900.1 bZIP 213 274
AT4G35900.2 bZIP 213 243

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FD Arabidopsis lyrata Al_scaffold_0007_453 I 0.894
chr2.CM0695.170.nc Lotus japonicus chr2.CM0695.170.nc I 0.840
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.839
Thhalv10023128m.g Eutrema salsugineum Thhalv10023128m.g N 0.821
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.818
mgf002556m Mimulus guttatus mgf002556m I 0.816
TCM_000152 Theobroma cacao TCM_000152 I 0.816
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N 0.814
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I 0.814
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I 0.809
Cla009066 Citrullus lanatus Cla009066 I 0.808
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.805
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.805
F775_17024 Aegilops tauschii F775_17024 I 0.804
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.804
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.803
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.803
Carubv10006580m.g Capsella rubella Carubv10006580m.g I 0.803
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.803
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.802
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.801
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.801
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.801
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.800
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.800
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.800
F775_28711 Aegilops tauschii F775_28711 I 0.800
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.799
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.799
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.799
OB01G46760 Oryza brachyantha OB01G46760 I 0.799
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.799
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.799
OBART01G37980 Oryza barthii OBART01G37980 I 0.799
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.799
OS01G0859300 Oryza sativa OS01G0859300 I 0.799
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.799
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.799
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.799
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.799
OBART01G34790 Oryza barthii OBART01G34790 I 0.797
OLONG_002030 Oryza longistaminata OLONG_002030 I 0.797
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I 0.797
F775_32479 Aegilops tauschii F775_32479 I 0.797
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I 0.797
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I 0.797
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I 0.797
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.797
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I 0.797
OB01G43630 Oryza brachyantha OB01G43630 I 0.797
OMERI01G32080 Oryza meridionalis OMERI01G32080 I 0.797
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.797
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.797
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.797
ONIVA01G39770 Oryza nivara ONIVA01G39770 I 0.797
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.797
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.797
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.796
OS05G0489700 Oryza sativa OS05G0489700 I 0.796
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.796
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.796
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.796
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.796
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.796
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.796
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.796
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.796
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.796
OB05G28440 Oryza brachyantha OB05G28440 I 0.796
OBART05G21000 Oryza barthii OBART05G21000 I 0.796
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.796
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.796
DPBF3 Arabidopsis thaliana AT3G56850 D 0.796
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.796
MDP0000273211 Malus domestica MDP0000273211 I 0.796
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.796
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.796
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.796
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.796
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.796
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.796
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.796
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.796
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.795
TCM_044596 Theobroma cacao TCM_044596 I 0.795
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.795
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.795
Cla013878 Citrullus lanatus Cla013878 I 0.795
Pm016826 Prunus mume Pm016826 I 0.795
F775_31964 Aegilops tauschii F775_31964 I 0.795
BGIOSGA010835 Oryza indica BGIOSGA010835 I 0.795
Carubv10018770m.g Capsella rubella Carubv10018770m.g I 0.795
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I 0.795
OPUNC01G33790 Oryza punctata OPUNC01G33790 I 0.795
OMERI03G14020 Oryza meridionalis OMERI03G14020 I 0.795
ONIVA03G16560 Oryza nivara ONIVA03G16560 I 0.795
Pavir.J38875 Panicum virgatum Pavir.J38875 I 0.794
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.794
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.794
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I 0.794
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.794
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I 0.794
BGIOSGA026419 Oryza indica BGIOSGA026419 I 0.794
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I 0.794
mgf011003m Mimulus guttatus mgf011003m I 0.794
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.794
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I 0.794
Ca_08143 Cicer arietinum Ca_08143 I 0.794
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I 0.794
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.794
Si002173m.g Setaria italica Si002173m.g I 0.794
OMERI07G23410 Oryza meridionalis OMERI07G23410 I 0.794
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.794
OB07G32300 Oryza brachyantha OB07G32300 I 0.794
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.794
OBART07G26790 Oryza barthii OBART07G26790 I 0.794
OPUNC07G25180 Oryza punctata OPUNC07G25180 I 0.794
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I 0.794
ONIVA07G26520 Oryza nivara ONIVA07G26520 I 0.794
OS07G0686100 Oryza sativa OS07G0686100 I 0.794
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I 0.794
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I 0.794
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.794
Si022639m.g Setaria italica Si022639m.g I 0.794
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.793
MDP0000215106 Malus domestica MDP0000215106 I 0.793
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I 0.793
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I 0.793
BGIOSGA000613 Oryza indica BGIOSGA000613 I 0.793
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.793
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.793
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I 0.793
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.793
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.793
GRMZM2G077124 Zea mays GRMZM2G077124 I 0.793
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I 0.793
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.793
OS01G0813100 Oryza sativa OS01G0813100 I 0.793
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.793
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I 0.793
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I 0.793
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.793
TRIUR3_12792 Triticum urartu TRIUR3_12792 I 0.793
TRIUR3_06726 Triticum urartu TRIUR3_06726 I 0.793
Sb02g043620 Sorghum bicolor Sb02g043620 I 0.793
MDP0000740787 Malus domestica MDP0000740787 I 0.792
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I 0.792
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I 0.792
30226.m002055 Ricinus communis 30226.m002055 I 0.791
PK24978.1 Cannabis sativa PK24978.1 D 0.791
OS03G0322700 Oryza sativa OS03G0322700 I 0.790
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.790
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.790
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.790
SapurV1A.0016s1330 Salix purpurea SapurV1A.0016s1330 I 0.789
SapurV1A.0025s0010 Salix purpurea SapurV1A.0025s0010 I 0.789
MDP0000701734 Malus domestica MDP0000701734 I 0.788
GLYMA06G47220 Glycine max GLYMA06G47220 I 0.787
Solyc02g083520.2 Solanum lycopersicum Solyc02g083520.2 I 0.787
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I 0.786
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I 0.786
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I 0.786
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.786
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I 0.785
mgf002176m Mimulus guttatus mgf002176m I 0.785
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.785
Bra014668 Brassica rapa Bra014668 I 0.784
Bra007274 Brassica rapa Bra007274 I 0.784
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I 0.784
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I 0.784
Carubv10023893m.g Capsella rubella Carubv10023893m.g I 0.784
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.784
Bra003253 Brassica rapa Bra003253 I 0.784
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.784
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I 0.784
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.784
Bo4g112690 Brassica oleracea Bo4g112690 I 0.784
Bra007276 Brassica rapa Bra007276 I 0.784
Bo8g091160 Brassica oleracea Bo8g091160 I 0.784
Bo6g072380 Brassica oleracea Bo6g072380 I 0.784
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I 0.783
EEL Arabidopsis thaliana AT2G41070 I 0.782
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I 0.782
Bo4g012940 Brassica oleracea Bo4g012940 I 0.782
LjSGA_023611.1 Lotus japonicus LjSGA_023611.1 I 0.782
GLYMA04G14840 Glycine max GLYMA04G14840 I 0.782
Gorai.003G007000 Gossypium raimondii Gorai.003G007000 N 0.782
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.782
Sb03g037740 Sorghum bicolor Sb03g037740 I 0.782
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I 0.782
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I 0.782
Bra010504 Brassica rapa Bra010504 N 0.761