CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FD
(
Arabidopsis thaliana
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
AT4G35900
T056913_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.796
0.516
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.796
0.516
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.796
0.516
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.796
0.516
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.796
0.516
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.791
0.677
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G35900.1
bZIP
213
274
SGNRRHKRMIKNRESAARSRARKQAYTNELELEVAHLQAENARLKRQQDQLKMAAAIQQPKK
AT4G35900.2
bZIP
213
243
SGNRRHKRMIKNRESAARSRARKQECASPLP
Links
Other
bZIP
family TFs
Other
Arabidopsis thaliana
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FD
Arabidopsis lyrata
Al_scaffold_0007_453
I
0.894
chr2.CM0695.170.nc
Lotus japonicus
chr2.CM0695.170.nc
I
0.840
ATBZIP27
Arabidopsis thaliana
AT2G17770
I
0.839
Thhalv10023128m.g
Eutrema salsugineum
Thhalv10023128m.g
N
0.821
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
0.818
mgf002556m
Mimulus guttatus
mgf002556m
I
0.816
TCM_000152
Theobroma cacao
TCM_000152
I
0.816
PGSC0003DMG400023897
Solanum tuberosum
PGSC0003DMG400023897
N
0.814
gene14556-v1.0-hybrid
Fragaria vesca
gene14556-v1.0-hybrid
I
0.814
Gorai.007G191800
Gossypium raimondii
Gorai.007G191800
I
0.809
Cla009066
Citrullus lanatus
Cla009066
I
0.808
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
0.805
cassava17300.m1
Manihot esculenta
cassava17300.m1
I
0.805
F775_17024
Aegilops tauschii
F775_17024
I
0.804
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
0.804
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
0.803
MLOC_4554
Hordeum vulgare
MLOC_4554
I
0.803
Carubv10006580m.g
Capsella rubella
Carubv10006580m.g
I
0.803
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
0.803
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
0.802
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
0.801
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
0.801
Sb01g036810
Sorghum bicolor
Sb01g036810
I
0.801
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
0.800
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
0.800
MLOC_16096
Hordeum vulgare
MLOC_16096
I
0.800
F775_28711
Aegilops tauschii
F775_28711
I
0.800
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
0.799
OLONG_014546
Oryza longistaminata
OLONG_014546
I
0.799
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
0.799
OB01G46760
Oryza brachyantha
OB01G46760
I
0.799
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.799
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.799
OBART01G37980
Oryza barthii
OBART01G37980
I
0.799
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
0.799
OS01G0859300
Oryza sativa
OS01G0859300
I
0.799
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
0.799
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.799
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.799
GRMZM2G168079
Zea mays
GRMZM2G168079
I
0.799
OBART01G34790
Oryza barthii
OBART01G34790
I
0.797
OLONG_002030
Oryza longistaminata
OLONG_002030
I
0.797
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.797
F775_32479
Aegilops tauschii
F775_32479
I
0.797
ORUFI01G38120
Oryza rufipogon
ORUFI01G38120
I
0.797
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.797
OGLUM01G38810
Oryza glumaepatula
OGLUM01G38810
I
0.797
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
0.797
ORGLA01G0286100
Oryza glaberrima
ORGLA01G0286100
I
0.797
OB01G43630
Oryza brachyantha
OB01G43630
I
0.797
OMERI01G32080
Oryza meridionalis
OMERI01G32080
I
0.797
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.797
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.797
MLOC_34679
Hordeum vulgare
MLOC_34679
I
0.797
ONIVA01G39770
Oryza nivara
ONIVA01G39770
I
0.797
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
0.797
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.797
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.796
OS05G0489700
Oryza sativa
OS05G0489700
I
0.796
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.796
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
0.796
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.796
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.796
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.796
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.796
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.796
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
0.796
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
0.796
OB05G28440
Oryza brachyantha
OB05G28440
I
0.796
OBART05G21000
Oryza barthii
OBART05G21000
I
0.796
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.796
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.796
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.796
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
0.796
MDP0000273211
Malus domestica
MDP0000273211
I
0.796
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.796
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.796
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.796
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.796
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.796
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.796
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.796
OLONG_003399
Oryza longistaminata
OLONG_003399
I
0.796
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
0.795
TCM_044596
Theobroma cacao
TCM_044596
I
0.795
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
0.795
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
0.795
Cla013878
Citrullus lanatus
Cla013878
I
0.795
Pm016826
Prunus mume
Pm016826
I
0.795
F775_31964
Aegilops tauschii
F775_31964
I
0.795
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.795
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.795
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.795
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.795
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.795
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.795
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
0.794
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.794
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.794
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.794
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.794
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.794
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.794
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.794
mgf011003m
Mimulus guttatus
mgf011003m
I
0.794
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.794
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
0.794
Ca_08143
Cicer arietinum
Ca_08143
I
0.794
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.794
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.794
Si002173m.g
Setaria italica
Si002173m.g
I
0.794
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.794
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
0.794
OB07G32300
Oryza brachyantha
OB07G32300
I
0.794
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.794
OBART07G26790
Oryza barthii
OBART07G26790
I
0.794
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.794
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.794
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.794
OS07G0686100
Oryza sativa
OS07G0686100
I
0.794
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.794
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.794
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.794
Si022639m.g
Setaria italica
Si022639m.g
I
0.794
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
0.793
MDP0000215106
Malus domestica
MDP0000215106
I
0.793
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
0.793
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
0.793
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
0.793
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
0.793
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
0.793
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.793
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
0.793
Sb09g023920
Sorghum bicolor
Sb09g023920
I
0.793
GRMZM2G077124
Zea mays
GRMZM2G077124
I
0.793
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.793
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
0.793
OS01G0813100
Oryza sativa
OS01G0813100
I
0.793
GRMZM2G161009
Zea mays
GRMZM2G161009
I
0.793
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
0.793
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.793
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.793
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.793
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.793
Sb02g043620
Sorghum bicolor
Sb02g043620
I
0.793
MDP0000740787
Malus domestica
MDP0000740787
I
0.792
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
0.792
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.792
30226.m002055
Ricinus communis
30226.m002055
I
0.791
PK24978.1
Cannabis sativa
PK24978.1
D
0.791
OS03G0322700
Oryza sativa
OS03G0322700
I
0.790
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
0.790
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
0.790
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
0.790
SapurV1A.0016s1330
Salix purpurea
SapurV1A.0016s1330
I
0.789
SapurV1A.0025s0010
Salix purpurea
SapurV1A.0025s0010
I
0.789
MDP0000701734
Malus domestica
MDP0000701734
I
0.788
GLYMA06G47220
Glycine max
GLYMA06G47220
I
0.787
Solyc02g083520.2
Solanum lycopersicum
Solyc02g083520.2
I
0.787
Aquca_009_00009
Aquilegia coerulea
Aquca_009_00009
I
0.786
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
0.786
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
0.786
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.786
orange1.1g037676m.g
Citrus sinensis
orange1.1g037676m.g
I
0.785
mgf002176m
Mimulus guttatus
mgf002176m
I
0.785
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
0.785
Bra014668
Brassica rapa
Bra014668
I
0.784
Bra007274
Brassica rapa
Bra007274
I
0.784
Cagra.1642s0072
Capsella grandiflora
Cagra.1642s0072
I
0.784
PGSC0003DMG400007208
Solanum tuberosum
PGSC0003DMG400007208
I
0.784
Carubv10023893m.g
Capsella rubella
Carubv10023893m.g
I
0.784
Thhalv10025203m.g
Eutrema salsugineum
Thhalv10025203m.g
I
0.784
Bra003253
Brassica rapa
Bra003253
I
0.784
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
0.784
SELMODRAFT_428822
Selaginella moellendorffii
SELMODRAFT_428822
I
0.784
BRADI2G21820
Brachypodium distachyon
BRADI2G21820
I
0.784
Bo4g112690
Brassica oleracea
Bo4g112690
I
0.784
Bra007276
Brassica rapa
Bra007276
I
0.784
Bo8g091160
Brassica oleracea
Bo8g091160
I
0.784
Bo6g072380
Brassica oleracea
Bo6g072380
I
0.784
Ciclev10028635m.g
Citrus clementina
Ciclev10028635m.g
I
0.783
EEL
Arabidopsis thaliana
AT2G41070
I
0.782
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
0.782
Bo4g012940
Brassica oleracea
Bo4g012940
I
0.782
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I
0.782
GLYMA04G14840
Glycine max
GLYMA04G14840
I
0.782
Gorai.003G007000
Gossypium raimondii
Gorai.003G007000
N
0.782
Sb03g040510
Sorghum bicolor
Sb03g040510
I
0.782
Sb03g037740
Sorghum bicolor
Sb03g037740
I
0.782
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
0.782
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
0.782
Bra010504
Brassica rapa
Bra010504
N
0.761