AT4G38900 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT4G38900 T056916_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN

NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.795 0.778
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G38900.1 bZIP 396 461
AT4G38900.2 bZIP 393 455
AT4G38900.3 bZIP 393 455

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I 0.877
Bra033582 Brassica rapa Bra033582 I 0.877
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I 0.877
Bo7g119550 Brassica oleracea Bo7g119550 I 0.877
Bra010722 Brassica rapa Bra010722 I 0.877
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I 0.875
Lus10042057.g Linum usitatissimum Lus10042057.g I 0.875
Cucsa.382180 Cucumis sativus Cucsa.382180 I 0.875
GLYMA12G04050 Glycine max GLYMA12G04050 I 0.875
Cla016125 Citrullus lanatus Cla016125 I 0.875
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I 0.875
MTR_4g072090 Medicago truncatula MTR_4g072090 I 0.875
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I 0.875
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I 0.875
Ca_27693 Cicer arietinum Ca_27693 I 0.875
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I 0.875
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I 0.875
Cla016124 Citrullus lanatus Cla016124 I 0.875
Lus10018061.g Linum usitatissimum Lus10018061.g I 0.875
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I 0.875
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I 0.875
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I 0.875
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I 0.875
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I 0.875
Cucsa.382190 Cucumis sativus Cucsa.382190 I 0.875
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I 0.875
PK00843.1 Cannabis sativa PK00843.1 I 0.875
mgf004912m Mimulus guttatus mgf004912m I 0.875
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I 0.875
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I 0.875
TCM_006766 Theobroma cacao TCM_006766 I 0.875
mgf000302m Mimulus guttatus mgf000302m I 0.875
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I 0.875
GLYMA11G11791 Glycine max GLYMA11G11791 I 0.875
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I 0.875
Al_scaffold_0007_76 Arabidopsis lyrata Al_scaffold_0007_76 I 0.874
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I 0.866
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I 0.866
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I 0.866
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I 0.866
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I 0.866
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I 0.866
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I 0.865
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I 0.865
Sb06g021350 Sorghum bicolor Sb06g021350 I 0.864
PDK_20s1312701g003 Phoenix dactylifera PDK_20s1312701g003 I 0.862
Bo3g149620 Brassica oleracea Bo3g149620 I 0.861
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I 0.860
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I 0.857
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I 0.852
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I 0.852
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I 0.852
MLOC_75510 Hordeum vulgare MLOC_75510 I 0.852
F775_32059 Aegilops tauschii F775_32059 I 0.852
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I 0.852
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I 0.852
BGIOSGA029106 Oryza indica BGIOSGA029106 I 0.852
TRIUR3_31242 Triticum urartu TRIUR3_31242 I 0.852
MLOC_64362 Hordeum vulgare MLOC_64362 I 0.852
BGIOSGA029105 Oryza indica BGIOSGA029105 I 0.852
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I 0.839
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I 0.839
GLYMA04G02850 Glycine max GLYMA04G02850 I 0.837
Si035841m.g Setaria italica Si035841m.g N 0.837
Sb01g048710 Sorghum bicolor Sb01g048710 N 0.837
GRMZM2G428184 Zea mays GRMZM2G428184 N 0.837
Pavir.J29906 Panicum virgatum Pavir.J29906 N 0.837
BRADI1G76690 Brachypodium distachyon BRADI1G76690 N 0.837
MLOC_10725 Hordeum vulgare MLOC_10725 N 0.835
GSMUA_Achr8G12090_001 Musa acuminata GSMUA_Achr8G12090_001 I 0.835
Pavir.J19159 Panicum virgatum Pavir.J19159 N 0.835
evm.TU.supercontig_81.160 Carica papaya evm.TU.supercontig_81.160 I 0.834
Cagra.1383s0070 Capsella grandiflora Cagra.1383s0070 N 0.833
Carubv10004500m.g Capsella rubella Carubv10004500m.g N 0.833
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I 0.827
MLOC_64781 Hordeum vulgare MLOC_64781 I 0.825
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I 0.825
RF2A Oryza sativa OS09G0516200 I 0.825
OMERI09G12160 Oryza meridionalis OMERI09G12160 I 0.825
OB09G23080 Oryza brachyantha OB09G23080 I 0.825
MTR_1g023690 Medicago truncatula MTR_1g023690 N 0.820
OLONG_011520 Oryza longistaminata OLONG_011520 N 0.818
ONIVA03G01800 Oryza nivara ONIVA03G01800 N 0.818
OGLUM03G02140 Oryza glumaepatula OGLUM03G02140 N 0.818
OBART03G02190 Oryza barthii OBART03G02190 N 0.818
GRMZM2G473274 Zea mays GRMZM2G473274 N 0.818
OPUNC03G01930 Oryza punctata OPUNC03G01930 N 0.818
OMERI03G02030 Oryza meridionalis OMERI03G02030 N 0.818
OS03G0127500 Oryza sativa OS03G0127500 N 0.818
ORUFI03G01930 Oryza rufipogon ORUFI03G01930 N 0.818
BGIOSGA011761 Oryza indica BGIOSGA011761 N 0.818
ORGLA03G0019600 Oryza glaberrima ORGLA03G0019600 N 0.818
OB03G12130 Oryza brachyantha OB03G12130 N 0.814
GLYMA11G13510 Glycine max GLYMA11G13510 I 0.812
cassava32399.m1 Manihot esculenta cassava32399.m1 I 0.812
PK20942.1 Cannabis sativa PK20942.1 D 0.812
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I 0.812
Cucsa.062530 Cucumis sativus Cucsa.062530 I 0.812
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I 0.812
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I 0.812
TCM_019998 Theobroma cacao TCM_019998 I 0.812
GLYMA12G05520 Glycine max GLYMA12G05520 I 0.812
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I 0.812
GSMUA_Achr1G08090_001 Musa acuminata GSMUA_Achr1G08090_001 N 0.811
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I 0.810
30131.m007145 Ricinus communis 30131.m007145 N 0.810
Si015587m.g Setaria italica Si015587m.g I 0.809
LPERR04G13880 Leersia perrieri LPERR04G13880 N 0.809
TCM_034172 Theobroma cacao TCM_034172 N 0.809
Sb07g025490 Sorghum bicolor Sb07g025490 I 0.809
Bra030637 Brassica rapa Bra030637 I 0.808
Bra015471 Brassica rapa Bra015471 I 0.808
Bo5g007170 Brassica oleracea Bo5g007170 I 0.808
LPERR03G02000 Leersia perrieri LPERR03G02000 N 0.805
Lus10019376.g Linum usitatissimum Lus10019376.g I 0.804
Ca_10755 Cicer arietinum Ca_10755 N 0.804
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I 0.803
TRIUR3_23538 Triticum urartu TRIUR3_23538 N 0.803
GRMZM2G332294 Zea mays GRMZM2G332294 I 0.802
orange1.1g014471m.g Citrus sinensis orange1.1g014471m.g N 0.801
OB10G23730 Oryza brachyantha OB10G23730 N 0.800
Pavir.Ia02926 Panicum virgatum Pavir.Ia02926 N 0.800
BRADI3G31890 Brachypodium distachyon BRADI3G31890 N 0.800
Pavir.J22781 Panicum virgatum Pavir.J22781 N 0.800
OLONG_016151 Oryza longistaminata OLONG_016151 N 0.800
GRMZM2G353553 Zea mays GRMZM2G353553 N 0.800
LPERR10G12670 Leersia perrieri LPERR10G12670 N 0.800
OPUNC10G15060 Oryza punctata OPUNC10G15060 N 0.800
Sb01g030770 Sorghum bicolor Sb01g030770 N 0.800
Si039566m.g Setaria italica Si039566m.g N 0.800
OS10G0531900 Oryza sativa OS10G0531900 N 0.800
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I 0.797
F775_33214 Aegilops tauschii F775_33214 N 0.796
TRIUR3_20880 Triticum urartu TRIUR3_20880 N 0.796
Pavir.Ib00162 Panicum virgatum Pavir.Ib00162 N 0.793
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I 0.793
Bo8g005940 Brassica oleracea Bo8g005940 I 0.793
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I 0.793
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I 0.793
Carubv10008993m.g Capsella rubella Carubv10008993m.g I 0.793
Cucsa.251880 Cucumis sativus Cucsa.251880 I 0.793
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I 0.793
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I 0.793
GSMUA_Achr5G20200_001 Musa acuminata GSMUA_Achr5G20200_001 N 0.793
Aquca_007_00377 Aquilegia coerulea Aquca_007_00377 N 0.790
GLYMA13G42030 Glycine max GLYMA13G42030 I 0.788
fgenesh1_pg.scaffold_3000202 Physcomitrella patens fgenesh1_pg.scaffold_3000202 N 0.788
GLYMA15G03350 Glycine max GLYMA15G03350 I 0.788
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I 0.788
Ca_02692 Cicer arietinum Ca_02692 I 0.788
MLOC_66865 Hordeum vulgare MLOC_66865 N 0.785
Traes_1AL_2AC682D6D Triticum aestivum Traes_1AL_2AC682D6D N 0.785
TRIUR3_15472 Triticum urartu TRIUR3_15472 N 0.785
Lus10012391.g Linum usitatissimum Lus10012391.g N 0.783