TGA1 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT5G65210 T056933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1
M01134_2.00		 Arabidopsis thaliana
NVTKACGHNN
NNDCGTMABN		 PBM
Lambert et al.(2019)
pTH7599		 (Direct) (Direct)
TGA1
M01788_2.00		 Arabidopsis thaliana
NVTGACGHNN
NNDCGTCABN		 PBM
Weirauch et al.(2014)
pTH7231		 (Direct) (Direct)
TGA1
M02657_2.00		 Arabidopsis thaliana
HNACGTCABSV
BSVTGACGTND		 SELEX
Mathelier et al.(2014)
MA0588.1		 (Direct) (Direct)
TGA1
M06793_2.00		 Arabidopsis thaliana
HNDVTGACGTCAKCD
HGMTGACGTCABHND		 Dap-seq
OMalley et al.(2016)
TGA1_colamp_a		 (Direct) (Direct)
TGA1
M06794_2.00		 Arabidopsis thaliana
DRTGACGTCAKCDDH
DHHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA1_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA4
M01786_2.00 		Arabidopsis thaliana
RVTKACGTND
HNACGTMABY		 PBM
Weirauch et al.(2014)
pTH8278 		0.798 0.959
TGA4
M06788_2.00 		Arabidopsis thaliana
TSACGTCAKCD
HGMTGACGTSA		 Dap-seq
OMalley et al.(2016)
TGA4_col_a 		0.798 0.959
TGA4
M06789_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNH
DNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA4_colamp_a 		0.798 0.959
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01134_2.00 bZIP 51 99
M01788_2.00 bZIP 51 99

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G65210.1 bZIP 80 128
AT5G65210.2 bZIP 80 128
AT5G65210.3 bZIP 80 128
AT5G65210.4 bZIP 80 128
AT5G65210.5 bZIP 80 128
AT5G65210.6 bZIP 10 58
AT5G65210.7 bZIP 80 128

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.13175s0098 Boechera stricta Bostr.13175s0098 I 0.798
Bostr.0568s0268 Boechera stricta Bostr.0568s0268 I 0.798
TGA4 Arabidopsis lyrata fgenesh2_kg.6__963__AT5G10030.1 I 0.798
Cagra.0917s0063 Capsella grandiflora Cagra.0917s0063 I 0.798
Cagra.1085s0054 Capsella grandiflora Cagra.1085s0054 I 0.798
Thhalv10004438m.g Eutrema salsugineum Thhalv10004438m.g I 0.798
Carubv10026623m.g Capsella rubella Carubv10026623m.g I 0.798
Carubv10001361m.g Capsella rubella Carubv10001361m.g I 0.798
TGA1 Arabidopsis lyrata Al_scaffold_0008_3070 I 0.798
Bra037809 Brassica rapa Bra037809 I 0.798
Bo00615s190 Brassica oleracea Bo00615s190 I 0.798
TGA4 Arabidopsis thaliana AT5G10030 D 0.798
Bra037374 Brassica rapa Bra037374 I 0.798
Bo3g099410 Brassica oleracea Bo3g099410 I 0.798
Bra031871 Brassica rapa Bra031871 I 0.798
Bra024366 Brassica rapa Bra024366 I 0.798
Bo9g018570 Brassica oleracea Bo9g018570 I 0.798
Thhalv10013890m.g Eutrema salsugineum Thhalv10013890m.g I 0.794