TGA1 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT5G65210 T056933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TGA1
M01134_2.00
Arabidopsis thaliana
NVTKACGHNN

NNDCGTMABN
PBM
Lambert et al.(2019)
pTH7599
(Direct) (Direct)
TGA1
M01788_2.00
Arabidopsis thaliana
NVTGACGHNN

NNDCGTCABN
PBM
Weirauch et al.(2014)
pTH7231
(Direct) (Direct)
TGA1
M02657_2.00
Arabidopsis thaliana
HNACGTCABSV

BSVTGACGTND
SELEX
Mathelier et al.(2014)
MA0588.1
(Direct) (Direct)
TGA1
M06793_2.00
Arabidopsis thaliana
HNDVTGACGTCAKCD

HGMTGACGTCABHND
Dap-seq
OMalley et al.(2016)
TGA1_colamp_a
(Direct) (Direct)
TGA1
M06794_2.00
Arabidopsis thaliana
DRTGACGTCAKCDDH

DHHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA1_col
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TGA4
M01786_2.00
Arabidopsis thaliana
RVTKACGTND

HNACGTMABY
PBM
Weirauch et al.(2014)
pTH8278
0.798 0.959
TGA4
M06788_2.00
Arabidopsis thaliana
TSACGTCAKCD

HGMTGACGTSA
Dap-seq
OMalley et al.(2016)
TGA4_col_a
0.798 0.959
TGA4
M06789_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNH

DNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA4_colamp_a
0.798 0.959
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01134_2.00 bZIP 51 99
M01788_2.00 bZIP 51 99

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G65210.1 bZIP 80 128
AT5G65210.2 bZIP 80 128
AT5G65210.3 bZIP 80 128
AT5G65210.4 bZIP 80 128
AT5G65210.5 bZIP 80 128
AT5G65210.6 bZIP 10 58
AT5G65210.7 bZIP 80 128

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002092 Ailuropoda melanoleuca ENSAMEG00000002092 I 0.000
POU6F1 Callithrix jacchus ENSCJAG00000017646 I 0.000
POU6F1 Canis familiaris ENSCAFG00000007790 I 0.000
ENSCSAG00000005904 Chlorocebus sabaeus ENSCSAG00000005904 I 0.000
POU6F1 Dasypus novemcinctus ENSDNOG00000009291 I 0.000
ENSDORG00000014216 Dipodomys ordii ENSDORG00000014216 I 0.000
ENSETEG00000018248 Echinops telfairi ENSETEG00000018248 I 0.000
POU6F1 Equus caballus ENSECAG00000024200 I 0.000
POU6F1 Erinaceus europaeus ENSEEUG00000014085 I 0.000
POU6F1 Felis catus ENSFCAG00000004408 I 0.000
POU6F1 Gorilla gorilla ENSGGOG00000000227 I 0.000
POU6F1 Homo sapiens ENSG00000184271 D 0.000
ENSSTOG00000009140 Ictidomys tridecemlineatus ENSSTOG00000009140 I 0.000
POU6F1 Loxodonta africana ENSLAFG00000020901 I 0.000
ENSP00000373895 Macaca fascicularis ENSP00000373895 I 0.000
ENSMMUG00000001139 Macaca mulatta ENSMMUG00000001139 I 0.000
ENSMEUG00000001957 Macropus eugenii ENSMEUG00000001957 I 0.000
ENSMICG00000009560 Microcebus murinus ENSMICG00000009560 I 0.000
POU6F1 Monodelphis domestica ENSMODG00000018676 I 0.000
ENSMPUG00000007990 Mustela putorius furo ENSMPUG00000007990 I 0.000
ENSNLEG00000017777 Nomascus leucogenys ENSNLEG00000017777 I 0.000
POU6F1 Otolemur garnettii ENSOGAG00000007973 I 0.000
POU6F1 Pan troglodytes ENSPTRG00000004950 I 0.000
ENSPPYG00000004523 Pongo abelii ENSPPYG00000004523 I 0.000
Pou6f1 Rattus norvegicus ENSRNOG00000004595 I 0.000
POU6F1 Tursiops truncatus ENSTTRG00000013841 I 0.000