CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cebpd
(
Mus musculus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BAE29047.1
T056962_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Acts upstream of or within several processes, including fat cell differentiation; positive regulation of osteoblast differentiation; and regulation of transcription, DNA-templated. Located in nucleus. Is expressed in several structures, including early embryo; female reproductive system; gut; integumental system; and liver. Orthologous to human CEBPD (CCAAT enhancer binding protein delta). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpd
M00989_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPD_M_HK
(Direct)
(Direct)
Cebpd
M00990_2.00
Mus musculus
TTRCGCAA
TTGCGYAA
PBM
Mann et al.(2013)
CEBPD_UM_HK
(Direct)
(Direct)
Cebpd
M01789_2.00
Mus musculus
NDDNRHAAB
VTTDYNHHN
PBM
Weirauch et al.(2014)
pTH5250
(Direct)
(Direct)
Cebpd
M08780_2.00
Mus musculus
NVTKDNGMAAK
MTTKCNHMABN
Misc
Kulakovskiy et al.(2013)
CEBPD_MOUSE.H11MO.0.B
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEBPD
M02859_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPD_1
0.883
1.000
CEBPD
M04380_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPD_eDBD_HT-SELEX
0.883
1.000
CEBPD
M08812_2.00
Homo sapiens
DVTKRHGCAAB
VTTGCDYMABH
Misc
Kulakovskiy et al.(2013)
CEBPD_HUMAN.H11MO.0.C
0.883
1.000
CEBPD
M10020_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPD_Q3
0.883
1.000
CEBPD
M10021_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPD_Q6_01
0.883
1.000
CEBPD
M10022_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPD_Q6
0.883
1.000
CEBPD
M04381_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPD_eDBD_Methyl-HT-SELEX
0.883
1.000
Cebpd
M10034_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPD_02
0.883
0.983
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00989_2.00
bZIP
28
86
YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFK
M00990_2.00
bZIP
28
86
YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFK
M01789_2.00
bZIP
21
79
YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BAE29047.1
bZIP
28
86
YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFK
Links
Other
bZIP
family TFs
Other
Mus musculus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy