CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo3g039150
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo3g039150
T057272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.855
0.969
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.855
0.969
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.855
0.969
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.840
0.750
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.826
0.719
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.826
0.750
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.806
0.703
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.792
0.719
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.792
0.719
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g039150.1
bZIP
88
151
ERELKRERRKQSNRESAKRSRLRKQAETEELARKVEALTAENMASRSELNQLNEKSDKLRGANA
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10023434m.g
Capsella rubella
Carubv10023434m.g
I
0.855
Bra004550
Brassica rapa
Bra004550
I
0.855
Cagra.0050s0071
Capsella grandiflora
Cagra.0050s0071
I
0.855
Bo4g010410
Brassica oleracea
Bo4g010410
I
0.855
GBF3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4002338
I
0.855
GBF3
Arabidopsis thaliana
AT2G46270
D
0.855
Thhalv10001533m.g
Eutrema salsugineum
Thhalv10001533m.g
I
0.855
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
0.840
PK09653.1
Cannabis sativa
PK09653.1
D
0.840
30174.m008698
Ricinus communis
30174.m008698
I
0.838
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
0.834
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
0.834
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
0.828
OMERI03G30340
Oryza meridionalis
OMERI03G30340
I
0.826
OMERI01G23000
Oryza meridionalis
OMERI01G23000
I
0.826
ONIVA01G28540
Oryza nivara
ONIVA01G28540
I
0.826
OPUNC01G25140
Oryza punctata
OPUNC01G25140
I
0.826
OLONG_022047
Oryza longistaminata
OLONG_022047
I
0.826
OGLUM05G27920
Oryza glumaepatula
OGLUM05G27920
I
0.826
OBART05G26280
Oryza barthii
OBART05G26280
I
0.826
OGLUM01G29060
Oryza glumaepatula
OGLUM01G29060
I
0.826
ORGLA01G0206000
Oryza glaberrima
ORGLA01G0206000
I
0.826
OLONG_003667
Oryza longistaminata
OLONG_003667
I
0.826
Si001929m.g
Setaria italica
Si001929m.g
I
0.826
OBART01G25300
Oryza barthii
OBART01G25300
I
0.826
Si022388m.g
Setaria italica
Si022388m.g
I
0.826
Q41109_PHAVU
Phaseolus vulgaris
Q41109_PHAVU
D
0.826
Sb09g028990
Sorghum bicolor
Sb09g028990
I
0.826
OS05G0569300
Oryza sativa
OS05G0569300
I
0.826
ORUFI01G28110
Oryza rufipogon
ORUFI01G28110
I
0.826
ORUFI05G28170
Oryza rufipogon
ORUFI05G28170
I
0.826
OS01G0658900
Oryza sativa
OS01G0658900
I
0.826
ORGLA05G0227800
Oryza glaberrima
ORGLA05G0227800
I
0.826
Q40645_ORYSA
Oryza sativa
Q40645_ORYSA
D
0.826
GRMZM2G117851
Zea mays
GRMZM2G117851
I
0.826
GLYMA16G03190
Glycine max
GLYMA16G03190
I
0.826
OB05G33790
Oryza brachyantha
OB05G33790
I
0.826
BGIOSGA001085
Oryza indica
BGIOSGA001085
I
0.826
LPERR01G21580
Leersia perrieri
LPERR01G21580
I
0.826
BRADI2G45567
Brachypodium distachyon
BRADI2G45567
I
0.826
LPERR05G21930
Leersia perrieri
LPERR05G21930
I
0.826
OB01G34490
Oryza brachyantha
OB01G34490
I
0.826
cassava43569.valid.m1
Manihot esculenta
cassava43569.valid.m1
I
0.825
cassava43571.valid.m1
Manihot esculenta
cassava43571.valid.m1
I
0.825
cassava43570.valid.m1
Manihot esculenta
cassava43570.valid.m1
I
0.825
cassava46468.m1
Manihot esculenta
cassava46468.m1
I
0.825
GLYMA07G06620
Glycine max
GLYMA07G06620
I
0.824
Eucgr.E00078
Eucalyptus grandis
Eucgr.E00078
I
0.824
Cla021500
Citrullus lanatus
Cla021500
I
0.824
Gorai.008G123200
Gossypium raimondii
Gorai.008G123200
I
0.824
Sb03g030050
Sorghum bicolor
Sb03g030050
I
0.824
Cucsa.258940
Cucumis sativus
Cucsa.258940
I
0.824
Gorai.004G153100
Gossypium raimondii
Gorai.004G153100
I
0.824
TCM_005210
Theobroma cacao
TCM_005210
I
0.824
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
0.823
Traes_1DL_23D036A85
Triticum aestivum
Traes_1DL_23D036A85
I
0.823
F775_07803
Aegilops tauschii
F775_07803
I
0.823
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
0.823
Traes_1AL_F18EC96DF
Triticum aestivum
Traes_1AL_F18EC96DF
I
0.823
Traes_1BL_C5FEAF06E
Triticum aestivum
Traes_1BL_C5FEAF06E
I
0.823
MLOC_6711
Hordeum vulgare
MLOC_6711
I
0.823
TRIUR3_18341
Triticum urartu
TRIUR3_18341
I
0.823
POPTR_0002s16870
Populus trichocarpa
POPTR_0002s16870
I
0.820
BRADI2G15940
Brachypodium distachyon
BRADI2G15940
I
0.820
PDK_20s1349941g001
Phoenix dactylifera
PDK_20s1349941g001
I
0.817
MDP0000493795
Malus domestica
MDP0000493795
I
0.812
MDP0000545420
Malus domestica
MDP0000545420
I
0.812
MDP0000138052
Malus domestica
MDP0000138052
I
0.812
mgf003302m
Mimulus guttatus
mgf003302m
I
0.810
mgf013423m
Mimulus guttatus
mgf013423m
I
0.810
Pm018422
Prunus mume
Pm018422
I
0.810
PRUPE_ppa006173mg
Prunus persica
PRUPE_ppa006173mg
I
0.810
GRMZM2G160136
Zea mays
GRMZM2G160136
I
0.809
OPUNC05G23850
Oryza punctata
OPUNC05G23850
I
0.809
GRMZM5G848942
Zea mays
GRMZM5G848942
I
0.809
ONIVA05G28290
Oryza nivara
ONIVA05G28290
I
0.809
GRMZM2G011932
Zea mays
GRMZM2G011932
I
0.809
GRMZM2G358701
Zea mays
GRMZM2G358701
I
0.809
BGIOSGA020389
Oryza indica
BGIOSGA020389
I
0.809
Pavir.Ca00968
Panicum virgatum
Pavir.Ca00968
I
0.808
Solyc05g050220.2
Solanum lycopersicum
Solyc05g050220.2
I
0.807
GLYMA03G41590
Glycine max
GLYMA03G41590
I
0.807
PGSC0003DMG400033876
Solanum tuberosum
PGSC0003DMG400033876
I
0.807
GLYMA19G44190
Glycine max
GLYMA19G44190
I
0.807
GBF2
Arabidopsis thaliana
AT4G01120
D
0.806
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
0.804
Bo9g003700
Brassica oleracea
Bo9g003700
I
0.803
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
0.803
Thhalv10028761m.g
Eutrema salsugineum
Thhalv10028761m.g
I
0.803
Carubv10001247m.g
Capsella rubella
Carubv10001247m.g
I
0.803
Bra037382
Brassica rapa
Bra037382
I
0.803
Bostr.7365s0064
Boechera stricta
Bostr.7365s0064
I
0.803
Cagra.1372s0011
Capsella grandiflora
Cagra.1372s0011
I
0.803
GBF2
Arabidopsis lyrata
Al_scaffold_0006_3899
I
0.802
GSMUA_Achr9G05310_001
Musa acuminata
GSMUA_Achr9G05310_001
I
0.801
Pavir.J01411
Panicum virgatum
Pavir.J01411
I
0.801
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
0.796
GSMUA_Achr6G32000_001
Musa acuminata
GSMUA_Achr6G32000_001
I
0.793
VIT_15s0046g01440
Vitis vinifera
VIT_15s0046g01440
I
0.793
TAF1_TOBAC
Nicotiana tabacum
TAF1_TOBAC
D
0.792
Ca_01293
Cicer arietinum
Ca_01293
I
0.792
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
0.792
Ciclev10020314m.g
Citrus clementina
Ciclev10020314m.g
I
0.790
orange1.1g014660m.g
Citrus sinensis
orange1.1g014660m.g
I
0.790
PGSC0003DMG400000088
Solanum tuberosum
PGSC0003DMG400000088
I
0.789
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
0.789
Solyc01g095460.2
Solanum lycopersicum
Solyc01g095460.2
I
0.789
VIT_02s0025g01020
Vitis vinifera
VIT_02s0025g01020
I
0.789
POPTR_0014s08990
Populus trichocarpa
POPTR_0014s08990
I
0.786
Bra010572
Brassica rapa
Bra010572
I
0.785
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
0.785
Bra011701
Brassica rapa
Bra011701
I
0.785
Bo1g005460
Brassica oleracea
Bo1g005460
I
0.785
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
0.783
MDP0000239688
Malus domestica
MDP0000239688
I
0.782