Bra008976 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra008976 T057423_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HY5
M06790_2.00
Arabidopsis thaliana
DNHGVTGACGTSDMN

NKHSACGTCABCDNH
Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a
0.850 0.938
HY5
M08407_2.00
Arabidopsis thaliana
NNHGMCACGTGKCDNN

NNHGMCACGTGKCDNN
ChIP-chip
Mathelier et al.(2014)
MA0551.1
0.850 0.938
HY5
M09919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HY5_01
0.850 0.938
Q39895_SOYBN
M10048_2.00
Glycine max Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_01
0.850 0.875
Q39895_SOYBN
M10049_2.00
Glycine max Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_02
0.850 0.875
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008976.1-P bZIP 83 146

Links

Other bZIP family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action