Bra023540 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra023540 T057477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.880 0.806
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.880 0.806
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra023540.1-P bZIP 72 133

Links

Other bZIP family TFs
Other Brassica rapa TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.890
Bo9g163740 Brassica oleracea Bo9g163740 I 0.887
Bra008670 Brassica rapa Bra008670 I 0.887
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.881
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.881
Bo3g010620 Brassica oleracea Bo3g010620 I 0.881
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.881
Bo2g012800 Brassica oleracea Bo2g012800 I 0.881
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.880
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.880
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.876
Bo3g010750 Brassica oleracea Bo3g010750 I 0.870
Bra006324 Brassica rapa Bra006324 I 0.870
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.867
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.867
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.867
Pm015434 Prunus mume Pm015434 I 0.867
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.859
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.857
MDP0000863909 Malus domestica MDP0000863909 I 0.857
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.855
Cla016748 Citrullus lanatus Cla016748 I 0.855
mgf017392m Mimulus guttatus mgf017392m I 0.852
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.850
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.850
Cla020641 Citrullus lanatus Cla020641 I 0.843
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.843
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.838
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.837
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.837
Cla005975 Citrullus lanatus Cla005975 I 0.837
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.837
30138.m003866 Ricinus communis 30138.m003866 I 0.837
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.837
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.837
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.837
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.837
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.837
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.837
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.836
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.836
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.835
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.834
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.833
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.830
Ca_09362 Cicer arietinum Ca_09362 I 0.824
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.823
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.823
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.823
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.823
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.823
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.823
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.821
MDP0000891108 Malus domestica MDP0000891108 I 0.820
MDP0000183562 Malus domestica MDP0000183562 I 0.820
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.819
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.816
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.815
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.814
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.813
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.812
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.812
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.812
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.812
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.812
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.812
30131.m007078 Ricinus communis 30131.m007078 I 0.812
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.811
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.809
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.809
MDP0000239026 Malus domestica MDP0000239026 I 0.808
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.808
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.807
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.807
Si019897m.g Setaria italica Si019897m.g I 0.805
Ca_17416 Cicer arietinum Ca_17416 I 0.804
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.804
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.804
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.803
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.803
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.802
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.802
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.802
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.802
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.802
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.801
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.801
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.801
Pm002353 Prunus mume Pm002353 I 0.801
TCM_000835 Theobroma cacao TCM_000835 I 0.801
Cla016841 Citrullus lanatus Cla016841 I 0.800
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.799
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.799
PK07533.1 Cannabis sativa PK07533.1 I 0.799
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.799
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.798
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.797
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.793
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.793
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.793
mgf003466m Mimulus guttatus mgf003466m I 0.792
MDP0000205823 Malus domestica MDP0000205823 I 0.791
mgf021986m Mimulus guttatus mgf021986m I 0.791
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.790
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.790
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.790
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.789
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.789
Si031238m.g Setaria italica Si031238m.g I 0.788
Cla008074 Citrullus lanatus Cla008074 I 0.788
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.788
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.787
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.786
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.785
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.785
MDP0000891899 Malus domestica MDP0000891899 I 0.784
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.784
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.783
MDP0000738631 Malus domestica MDP0000738631 I 0.783
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.783
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.783
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.783
mgf007535m Mimulus guttatus mgf007535m I 0.782
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.782
mgf013074m Mimulus guttatus mgf013074m I 0.782
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.782