Bra037374 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra037374 T057527_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TGA1
M01788_2.00
Arabidopsis thaliana
NVTGACGHNN

NNDCGTCABN
PBM
Weirauch et al.(2014)
pTH7231
0.798 0.959
TGA1
M01134_2.00
Arabidopsis thaliana
NVTKACGHNN

NNDCGTMABN
PBM
Lambert et al.(2019)
pTH7599
0.798 0.959
TGA1
M06793_2.00
Arabidopsis thaliana
HNDVTGACGTCAKCD

HGMTGACGTCABHND
Dap-seq
OMalley et al.(2016)
TGA1_colamp_a
0.798 0.959
TGA1
M06794_2.00
Arabidopsis thaliana
DRTGACGTCAKCDDH

DHHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA1_col
0.798 0.959
TGA1
M02657_2.00
Arabidopsis thaliana
HNACGTCABSV

BSVTGACGTND
SELEX
Mathelier et al.(2014)
MA0588.1
0.798 0.959
TGA4
M01786_2.00
Arabidopsis thaliana
RVTKACGTND

HNACGTMABY
PBM
Weirauch et al.(2014)
pTH8278
0.798 0.918
TGA4
M06788_2.00
Arabidopsis thaliana
TSACGTCAKCD

HGMTGACGTSA
Dap-seq
OMalley et al.(2016)
TGA4_col_a
0.798 0.918
TGA4
M06789_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNH

DNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA4_colamp_a
0.798 0.918
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra037374.1-P bZIP 61 109

Links

Other bZIP family TFs
Other Brassica rapa TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo00615s190 Brassica oleracea Bo00615s190 I 0.798
Bo3g099410 Brassica oleracea Bo3g099410 I 0.798
Bo9g018570 Brassica oleracea Bo9g018570 I 0.798
Bostr.0568s0268 Boechera stricta Bostr.0568s0268 I 0.798
Bostr.13175s0098 Boechera stricta Bostr.13175s0098 I 0.798
Bra024366 Brassica rapa Bra024366 I 0.798
Bra031871 Brassica rapa Bra031871 I 0.798
Bra037809 Brassica rapa Bra037809 I 0.798
Cagra.0917s0063 Capsella grandiflora Cagra.0917s0063 I 0.798
Cagra.1085s0054 Capsella grandiflora Cagra.1085s0054 I 0.798
Carubv10001361m.g Capsella rubella Carubv10001361m.g I 0.798
Carubv10026623m.g Capsella rubella Carubv10026623m.g I 0.798
TGA1 Arabidopsis thaliana AT5G65210 D 0.798
TGA1 Arabidopsis lyrata Al_scaffold_0008_3070 I 0.798
TGA4 Arabidopsis lyrata fgenesh2_kg.6__963__AT5G10030.1 I 0.798
TGA4 Arabidopsis thaliana AT5G10030 D 0.798
Thhalv10004438m.g Eutrema salsugineum Thhalv10004438m.g I 0.798
Thhalv10013890m.g Eutrema salsugineum Thhalv10013890m.g I 0.794