CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G68560
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI1G68560
T057559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.797
0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.797
0.625
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.784
0.688
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G68560.1
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
345
379
KEELKRLQEKCDSLTSENTSLHEKLKELDGEKSNG
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy