CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G55550
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI2G55550
T057580_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.816
0.661
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.816
0.661
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.787
0.500
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G55550.1
bZIP
331
393
MERRHRRMIKNRESAARSRARRQAYTVELEAELDKLKEENARLKAQEGSILMAKQQKMENEMM
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ABF2
Arabidopsis lyrata
fgenesh2_kg.1__3804__AT1G45249.1
I
0.816
ABF2
Arabidopsis thaliana
AT1G45249
D
0.816
Bra040260
Brassica rapa
Bra040260
I
0.816
Thhalv10011493m.g
Eutrema salsugineum
Thhalv10011493m.g
I
0.816
Bo6g006970
Brassica oleracea
Bo6g006970
I
0.816
Bra019436
Brassica rapa
Bra019436
I
0.814
Lus10043386.g
Linum usitatissimum
Lus10043386.g
I
0.812
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.812
Carubv10019243m.g
Capsella rubella
Carubv10019243m.g
I
0.808
Cagra.2192s0012
Capsella grandiflora
Cagra.2192s0012
I
0.808
DPBF2
Arabidopsis thaliana
AT3G44460
I
0.808
Bostr.0556s0737
Boechera stricta
Bostr.0556s0737
I
0.808
Bo3g122120
Brassica oleracea
Bo3g122120
I
0.808
DPBF2
Arabidopsis lyrata
fgenesh2_kg.5__854__AT3G44460.1
I
0.808
Carubv10009177m.g
Capsella rubella
Carubv10009177m.g
I
0.804
Cagra.10917s0002
Capsella grandiflora
Cagra.10917s0002
I
0.804
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.803
Gorai.013G258300
Gossypium raimondii
Gorai.013G258300
I
0.803
GSMUA_Achr10G00420_001
Musa acuminata
GSMUA_Achr10G00420_001
I
0.803
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.803
OBART01G37980
Oryza barthii
OBART01G37980
I
0.803
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.803
Eucgr.A02171
Eucalyptus grandis
Eucgr.A02171
I
0.800
Ca_19689
Cicer arietinum
Ca_19689
I
0.799
MTR_6g026800
Medicago truncatula
MTR_6g026800
I
0.799
POPTR_0016s02460
Populus trichocarpa
POPTR_0016s02460
I
0.789
POPTR_0006s02670
Populus trichocarpa
POPTR_0006s02670
I
0.789
SapurV1A.0362s0080
Salix purpurea
SapurV1A.0362s0080
I
0.789
SapurV1A.2287s0010
Salix purpurea
SapurV1A.2287s0010
I
0.789
PK24205.1
Cannabis sativa
PK24205.1
D
0.787
Pm005288
Prunus mume
Pm005288
I
0.786
GSMUA_Achr6G04270_001
Musa acuminata
GSMUA_Achr6G04270_001
I
0.785
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
0.785
Lus10019542.g
Linum usitatissimum
Lus10019542.g
N
0.784
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
0.784
SapurV1A.0878s0160
Salix purpurea
SapurV1A.0878s0160
I
0.783
GLYMA06G04353
Glycine max
GLYMA06G04353
I
0.783
Eucgr.F02337
Eucalyptus grandis
Eucgr.F02337
I
0.783
POPTR_0002s12710
Populus trichocarpa
POPTR_0002s12710
I
0.783
cassava12275.valid.m1
Manihot esculenta
cassava12275.valid.m1
I
0.783
30170.m013868
Ricinus communis
30170.m013868
I
0.783
cassava42669.valid.m1
Manihot esculenta
cassava42669.valid.m1
I
0.783
POPTR_0014s02810
Populus trichocarpa
POPTR_0014s02810
I
0.783
Ca_01548
Cicer arietinum
Ca_01548
I
0.783
SapurV1A.0167s0060
Salix purpurea
SapurV1A.0167s0060
I
0.783
GLYMA04G04170
Glycine max
GLYMA04G04170
I
0.783
Ciclev10001159m.g
Citrus clementina
Ciclev10001159m.g
I
0.782
PGSC0003DMG400008011
Solanum tuberosum
PGSC0003DMG400008011
I
0.782
MTR_3g101780
Medicago truncatula
MTR_3g101780
I
0.782
evm.TU.supercontig_49.26
Carica papaya
evm.TU.supercontig_49.26
I
0.782
orange1.1g021624m.g
Citrus sinensis
orange1.1g021624m.g
I
0.782
orange1.1g025340m.g
Citrus sinensis
orange1.1g025340m.g
I
0.782