CBN07656 (Caenorhabditis brenneri)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 CBN07656 T057959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NRL
M02835_2.00
Homo sapiens
VTCAGCRNDHN

NDHNYGCTGAB
SELEX
Jolma et al.(2013)
NRL_1
0.807 0.429
NRL
M04277_2.00
Homo sapiens
NGTCAGCRNDWHN

NDWHNYGCTGACN
SELEX
Yin et al.(2017)
NRL_eDBD_HT-SELEX
0.807 0.429
NRL
M04279_2.00
Homo sapiens
HGTCAGCANWWWH

DWWWNTGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_HT-SELEX
0.807 0.429
NRL
M04278_2.00
Homo sapiens
NRTCAGCRNDWHN

NDWHNYGCTGAYN
SELEX
Yin et al.(2017)
NRL_eDBD_Methyl-HT-SELEX
0.807 0.429
NRL
M04280_2.00
Homo sapiens
HGTCAGCRNWWHN

NDWWNYGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_Methyl-HT-SELEX
0.807 0.429
tj
M03632_2.00
Drosophila melanogaster
HGTCAGCANWWH

DWWNTGCTGACD
SELEX
Nitta et al.(2015)
tj_1
0.793 0.429
tj
M03633_2.00
Drosophila melanogaster
NNNYGCHDHGTCAGCANWW

WWNTGCTGACDHDGCRNNN
SELEX
Nitta et al.(2015)
tj_2
0.793 0.429
tj
M06015_2.00
Drosophila melanogaster
GCKDMSTCAGCA

TGCTGASKHMGC
B1H
Zhu et al.(2011)
tj_SANGER_5_FBgn0000964
0.793 0.429
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN07656 bZIP 1005 1060

Links

Other bZIP family TFs
Other Caenorhabditis brenneri TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action