CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_18594
(
Daphnia pulex
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
DAPPUDRAFT_18594
T058669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.794
0.650
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.794
0.650
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.794
0.650
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.794
0.650
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.794
0.650
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.794
0.650
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.794
0.650
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.794
0.650
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.794
0.650
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.794
0.650
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.794
0.650
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.794
0.650
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.794
0.650
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.794
0.650
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.794
0.650
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.791
0.650
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.791
0.650
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.791
0.650
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.791
0.650
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.791
0.650
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.791
0.650
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.791
0.650
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.791
0.650
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.791
0.650
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.791
0.650
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.791
0.650
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX88426
bZIP
7
66
TDEYRRRRERNNIAVRKSREKAKLRSRETEEKVKLLVRDNERLQKRVEQLTEELNILHTL
Links
Other
bZIP
family TFs
Other
Daphnia pulex
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHUM433250
Pediculus humanus
PHUM433250
I
0.830
L798_13978
Zootermopsis nevadensis
L798_13978
I
0.830
ACYPI003971
Acyrthosiphon pisum
ACYPI003971
I
0.829
CLEC002077
Cimex lectularius
CLEC002077
I
0.826
HHAL004160-PA
Halyomorpha halys
HHAL004160-PA
I
0.819
Cmyd_10017449
Chelonia mydas
Cmyd_10017449
I
0.803
Hsal_02456--XP_394681.2_APIME
Harpegnathos saltator
Hsal_02456--XP_394681.2_APIME
I
0.803
LDEC017703
Leptinotarsa decemlineata
LDEC017703
I
0.802
cebpa
Takifugu rubripes
ENSTRUG00000006383
I
0.802
cebpa
Tetraodon nigroviridis
ENSTNIG00000003102
I
0.800
ENSAMXG00000026122
Astyanax mexicanus
ENSAMXG00000026122
I
0.800
Cflo_01516--XP_394681.2_APIME
Camponotus floridanus
Cflo_01516--XP_394681.2_APIME
I
0.799
ACEP26309
Atta cephalotes
ACEP26309
I
0.799
GB44204
Apis mellifera
GB44204
I
0.799
SINV13631
Solenopsis invicta
SINV13631
I
0.796
YQE_11799
Dendroctonus ponderosae
YQE_11799
I
0.795
TC009220
Tribolium castaneum
TC009220
I
0.795
ENSSSCG00000028739
Sus scrofa
ENSSSCG00000028739
I
0.794
CEBPB
Tursiops truncatus
ENSTTRG00000003985
I
0.794
CEBPB
Otolemur garnettii
ENSOGAG00000026467
I
0.794
CEBPB
Pan troglodytes
ENSPTRG00000041263
I
0.794
ENSPANG00000007537
Papio anubis
ENSPANG00000007537
I
0.794
ENSSSCG00000024816
Sus scrofa
ENSSSCG00000024816
I
0.794
Cebpb
Rattus norvegicus
ENSRNOG00000057347
I
0.794
ENSPPYG00000011124
Pongo abelii
ENSPPYG00000011124
I
0.794
CEBPB
Pteropus vampyrus
ENSPVAG00000003541
I
0.794
CEBPB
Oryctolagus cuniculus
ENSOCUG00000024667
I
0.794
ENSMEUG00000000063
Macropus eugenii
ENSMEUG00000000063
I
0.794
ENSCSAG00000018746
Chlorocebus sabaeus
ENSCSAG00000018746
I
0.794
CEBPB
Dasypus novemcinctus
ENSDNOG00000041573
I
0.794
ENSCPOG00000000811
Cavia porcellus
ENSCPOG00000000811
I
0.794
CEBPB
Callithrix jacchus
ENSCJAG00000000526
I
0.794
ENSAMEG00000013456
Ailuropoda melanoleuca
ENSAMEG00000013456
I
0.794
CEBPB
Canis familiaris
ENSCAFG00000031326
I
0.794
CEBPB
Homo sapiens
ENSG00000172216
D
0.794
CEBPB
Gorilla gorilla
ENSGGOG00000025010
I
0.794
ENSMODG00000016314
Monodelphis domestica
ENSMODG00000016314
I
0.794
ENSMPUG00000019019
Mustela putorius furo
ENSMPUG00000019019
I
0.794
ENSMMUG00000004874
Macaca mulatta
ENSMMUG00000004874
I
0.794
CEBPB
Myotis lucifugus
ENSMLUG00000002060
I
0.794
ENSOARG00000013395
Ovis aries
ENSOARG00000013395
I
0.794
ENSLAFG00000026180
Loxodonta africana
ENSLAFG00000026180
I
0.794
Ogr08532
Ophisaurus gracilis
Ogr08532
I
0.791
Cebpb
Mus musculus
ENSMUSG00000056501
D
0.791
CEBPB
Gallus gallus
ENSGALG00000008014
I
0.791
ENSFALG00000014081
Ficedula albicollis
ENSFALG00000014081
I
0.791
CEBPB
Anolis carolinensis
ENSACAG00000015567
I
0.791
CEBPB
Taeniopygia guttata
ENSTGUG00000008707
I
0.791
ENSLACG00000002076
Latimeria chalumnae
ENSLACG00000002076
I
0.790
Pvit_03335
Pogona vitticeps
Pvit_03335
I
0.790
ENSLOCG00000017586
Lepisosteus oculatus
ENSLOCG00000017586
I
0.789
cebpa
Danio rerio
ENSDARG00000036074
I
0.789
cebpb
Xenopus tropicalis
XB-GENE-479779
I
0.787
NV14868
Nasonia vitripennis
NV14868
I
0.786
cebpb
Oryzias latipes
ENSORLG00000015032
I
0.783
cebpb
Danio rerio
ENSDARG00000042725
I
0.783
ENSAMXG00000018723
Astyanax mexicanus
ENSAMXG00000018723
I
0.783
ENSGMOG00000019534
Gadus morhua
ENSGMOG00000019534
I
0.783
ENSONIG00000021137
Oreochromis niloticus
ENSONIG00000021137
I
0.783
cebpb
Takifugu rubripes
ENSTRUG00000007449
I
0.783
ENSPFOG00000020954
Poecilia formosa
ENSPFOG00000020954
I
0.783
ENSXMAG00000019665
Xiphophorus maculatus
ENSXMAG00000019665
I
0.783
cebpb.L
Xenopus laevis
XB-GENE-865306
I
0.782