CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CEBPB
(
Homo sapiens
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSG00000172216
T059757_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This intronless gene encodes a transcription factor that contains a basic leucine zipper (bZIP) domain. The encoded protein functions as a homodimer but can also form heterodimers with CCAAT/enhancer-binding proteins alpha, delta, and gamma. Activity of this protein is important in the regulation of genes involved in immune and inflammatory responses, among other processes. The use of alternative in-frame AUG start codons results in multiple protein isoforms, each with distinct biological functions. [provided by RefSeq, Oct 2013]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
(Direct)
(Direct)
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
(Direct)
(Direct)
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
(Direct)
(Direct)
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
(Direct)
(Direct)
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
(Direct)
(Direct)
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
(Direct)
(Direct)
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
(Direct)
(Direct)
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
(Direct)
(Direct)
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
(Direct)
(Direct)
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
(Direct)
(Direct)
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
(Direct)
(Direct)
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
(Direct)
(Direct)
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
(Direct)
(Direct)
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
(Direct)
(Direct)
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.898
0.968
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.898
0.968
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.898
0.968
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.898
0.968
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.898
0.968
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.898
0.968
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.898
0.968
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.898
0.968
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.898
0.968
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.898
0.968
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.898
0.968
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.844
0.726
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.844
0.726
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.844
0.726
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.844
0.726
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.844
0.726
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.844
0.726
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.844
0.726
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.844
0.726
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.844
0.726
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.844
0.726
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.844
0.726
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.844
0.726
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.844
0.726
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.844
0.726
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.824
0.758
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.824
0.758
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.824
0.758
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.824
0.758
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.824
0.758
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.824
0.758
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.824
0.758
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.824
0.758
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.824
0.758
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.822
0.726
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.822
0.726
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000305422
bZIP
271
332
SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFK
Links
Other
bZIP
family TFs
Other
Homo sapiens
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy