Xbp1 (Mus musculus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSMUSG00000020484 T060458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Xbp1
M00757_2.00		 Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852		 (Direct) (Direct)
Xbp1
M01802_2.00		 Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019		 (Direct) (Direct)
Xbp1
M08818_2.00		 Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.830 0.931
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.830 0.931
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.830 0.931
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.830 0.931
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.830 0.931
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.830 0.931
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.872 0.969
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.830 0.931
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.830 0.931
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.830 0.931
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.830 0.931
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.830 0.931
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00757_2.00 bZIP 16 79
M01802_2.00 bZIP 16 79

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000054852 bZIP 61 124
ENSMUSP00000134088 bZIP 1 56
ENSMUSP00000135768 bZIP 14 71

Links

Other bZIP family TFs
Other Mus musculus TFs

Invalid Input OrderBy

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action