CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bach1
(
Mus musculus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMUSG00000025612
T060464_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including alimentary system; cardiovascular system; central nervous system; genitourinary system; and sensory organ. Orthologous to human BACH1 (BTB domain and CNC homolog 1). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bach1
M08823_2.00
Mus musculus
ASCRTGACTCAGCR
YGCTGAGTCAYGST
Misc
Kulakovskiy et al.(2013)
BACH1_MOUSE.H11MO.0.C
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BACH1
M08184_2.00
Homo sapiens
RTCACGTG
CACGTGAY
ChIP-seq
Contrino et al.(2012)
Mv45
0.931
1.000
BACH1
M08185_2.00
Homo sapiens
TGASTCAGCA
TGCTGASTCA
ChIP-seq
Contrino et al.(2012)
Mv46
0.931
1.000
BACH1
M08186_2.00
Homo sapiens
TCAGCADTT
AAHTGCTGA
ChIP-seq
Contrino et al.(2012)
Mv47
0.931
1.000
BACH1
M08800_2.00
Homo sapiens
VNVTGACTCAGCA
TGCTGAGTCABNB
Misc
Kulakovskiy et al.(2013)
BACH1_HUMAN.H11MO.0.A
0.931
1.000
BACH1
M09488_2.00
Homo sapiens
RTGACTCAGCANWWH
DWWNTGCTGAGTCAY
Misc
Heinz et al.(2010)
K562-Bach1_GSE31477
0.931
1.000
BACH1
M09975_2.00
Homo sapiens
VNBATGACTCATSNB
VNSATGAGTCATVNB
Transfac
Matys et al.(2006)
V$BACH1_01
0.931
1.000
BACH1
M09976_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BACH1_Q3
0.931
1.000
Bach2
M08832_2.00
Mus musculus
RTGACTCAGCN
NGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
BACH2_MOUSE.H11MO.0.A
0.838
0.721
BACH2
M04247_2.00
Homo sapiens
NWWNCATGASTCATSNHWN
NWDNSATGASTCATGNWWN
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_1
0.838
0.689
BACH2
M04248_2.00
Homo sapiens
DWANSATGACGTSATSNTWD
HWANSATSACGTCATSNTWH
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_2
0.838
0.689
BACH2
M08065_2.00
Homo sapiens
NVTGACTCAGCANN
NNTGCTGAGTCABN
ChIP-seq
Mathelier et al.(2014)
MA1101.1
0.838
0.689
BACH2
M08787_2.00
Homo sapiens
VTGASTCAGCA
TGCTGASTCAB
Misc
Kulakovskiy et al.(2013)
BACH2_HUMAN.H11MO.0.A
0.838
0.689
BACH2
M09484_2.00
Homo sapiens
TGASTCAGCN
NGCTGASTCA
Misc
Heinz et al.(2010)
OCILy7-Bach2_GSE44420
0.838
0.689
BACH2
M09938_2.00
Homo sapiens
BVTGACKCAYS
SRTGMGTCABV
Transfac
Matys et al.(2006)
V$BACH2_01
0.838
0.689
BACH2
M04249_2.00
Homo sapiens
NWANCATGASTCATSNWWN
NWWNSATGASTCATGNTWN
SELEX
Yin et al.(2017)
BACH2_eDBD_Methyl-HT-SELEX
0.838
0.689
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000026703
bZIP
561
621
IHDIRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHILSTLGETKQNLT
Links
Other
bZIP
family TFs
Other
Mus musculus
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy