CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000003225
(
Pelodiscus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPSIG00000003225
T061162_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf2
M01808_2.00
Mus musculus
NRTKAYGYMD
HKRCRTMAYN
PBM
Weirauch et al.(2014)
pTH5083
0.936
0.984
Atf2
M08827_2.00
Mus musculus
VTGACVTCABY
RVTGABGTCAB
Misc
Kulakovskiy et al.(2013)
ATF2_MOUSE.H11MO.0.A
0.936
0.984
Atf2
M09493_2.00
Mus musculus
NNVTGABVTCAB
VTGABVTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf2_GSE56872
0.936
0.984
Creb5
M02866_2.00
Mus musculus
NATGACGTCAYH
DRTGACGTCATN
SELEX
Jolma et al.(2013)
Creb5_1
0.901
0.828
CREB5
M04299_2.00
Homo sapiens
NVTKACRTMABN
NVTKAYGTMABN
SELEX
Yin et al.(2017)
CREB5_eDBD_HT-SELEX
0.901
0.828
CREB5
M04301_2.00
Homo sapiens
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Yin et al.(2017)
CREB5_FL_HT-SELEX
0.901
0.828
CREB5
M04300_2.00
Homo sapiens
NRTKACRTCAYN
NRTGAYGTMAYN
SELEX
Yin et al.(2017)
CREB5_eDBD_Methyl-HT-SELEX
0.901
0.828
CREB5
M04302_2.00
Homo sapiens
NATGACRTCAYN
NRTGAYGTCATN
SELEX
Yin et al.(2017)
CREB5_FL_Methyl-HT-SELEX
0.901
0.828
Atf7
M01823_2.00
Mus musculus
HKACGTMAYN
NRTKACGTMD
PBM
Weirauch et al.(2014)
pTH5081
0.886
0.844
asl-1
M01147_2.00
Neurospora crassa
NVTKACGHNN
NNDCGTMABN
PBM
Lambert et al.(2019)
pTH8918
0.787
0.516
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000003374
bZIP
338
401
DPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQNEVTLLRNEVAQLKQLLL
ENSPSIP00000003375
bZIP
332
395
DPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQNEVTLLRNEVAQLKQLLL
Links
Other
bZIP
family TFs
Other
Pelodiscus sinensis
TFs
285 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC210616.4_FG005
Zea mays
AC210616.4_FG005
N
0.000
OPUNC04G12540
Oryza punctata
OPUNC04G12540
N
0.000
ORGLA02G0186100
Oryza glaberrima
ORGLA02G0186100
N
0.000
ORGLA04G0116800
Oryza glaberrima
ORGLA04G0116800
N
0.000
ORUFI02G22630
Oryza rufipogon
ORUFI02G22630
N
0.000
OS04G0456900
Oryza sativa
OS04G0456900
N
0.000
Sb04g023730
Sorghum bicolor
Sb04g023730
N
0.000
Sb06g018710
Sorghum bicolor
Sb06g018710
N
0.000
Si009909m.g
Setaria italica
Si009909m.g
N
0.000
Si017107m.g
Setaria italica
Si017107m.g
N
0.000
Traes_2AL_C76F4E089
Triticum aestivum
Traes_2AL_C76F4E089
N
0.000
Traes_2BL_7BE6FCE7D
Triticum aestivum
Traes_2BL_7BE6FCE7D
N
0.000
TRAES3BF114600150CFD_g
Triticum aestivum
TRAES3BF114600150CFD_g
N
0.000
Traes_6DL_10077D5F6
Triticum aestivum
Traes_6DL_10077D5F6
N
0.000
TRIUR3_20987
Triticum urartu
TRIUR3_20987
N
0.000
Pavir.Aa01600
Panicum virgatum
Pavir.Aa01600
N
0.000
Pavir.Ab01993
Panicum virgatum
Pavir.Ab01993
N
0.000
OPUNC02G19370
Oryza punctata
OPUNC02G19370
N
0.000
ONIVA04G12810
Oryza nivara
ONIVA04G12810
N
0.000
ONIVA02G23720
Oryza nivara
ONIVA02G23720
N
0.000
BGIOSGA008478
Oryza indica
BGIOSGA008478
N
0.000
BGIOSGA016530
Oryza indica
BGIOSGA016530
N
0.000
BRADI3G46680
Brachypodium distachyon
BRADI3G46680
N
0.000
BRADI3G46690
Brachypodium distachyon
BRADI3G46690
N
0.000
BRADI5G12127
Brachypodium distachyon
BRADI5G12127
N
0.000
F775_13449
Aegilops tauschii
F775_13449
N
0.000
F775_15862
Aegilops tauschii
F775_15862
N
0.000
GRMZM2G040481
Zea mays
GRMZM2G040481
N
0.000
GRMZM2G044322
Zea mays
GRMZM2G044322
N
0.000
LPERR02G17460
Leersia perrieri
LPERR02G17460
N
0.000
LPERR04G11520
Leersia perrieri
LPERR04G11520
N
0.000
MLOC_13416
Hordeum vulgare
MLOC_13416
N
0.000
OGLUM02G21750
Oryza glumaepatula
OGLUM02G21750
N
0.000
OGLUM04G14540
Oryza glumaepatula
OGLUM04G14540
N
0.000
OMERI02G21100
Oryza meridionalis
OMERI02G21100
N
0.000
OMERI04G13070
Oryza meridionalis
OMERI04G13070
N
0.000
Pavir.Gb01550
Panicum virgatum
Pavir.Gb01550
N
0.000