HLF (Pan troglodytes)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSPTRG00000009424 T061213_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN

NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.896 1.000
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN

NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.896 1.000
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.896 1.000
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB

VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.896 1.000
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS

SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.896 1.000
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH

DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.896 1.000
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY

RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.896 1.000
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.896 1.000
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN

NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.847 0.794
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN

NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.847 0.794
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN

NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.847 0.794
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN

NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.847 0.794
TEF
M09983_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.847 0.794
TEF
M09984_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.847 0.794
TEF
M09985_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.847 0.794
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY

RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.847 0.794
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN

NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.847 0.794
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB

VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.795 0.683
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY

RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.795 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000016011 bZIP 224 286

Links

Other bZIP family TFs
Other Pan troglodytes TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.000
Bra004096 Brassica rapa Bra004096 N 0.000
Bra034007 Brassica rapa Bra034007 N 0.000
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.000
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.000
Ca_08511 Cicer arietinum Ca_08511 N 0.000
Ca_11361 Cicer arietinum Ca_11361 N 0.000
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.000
Cla000701 Citrullus lanatus Cla000701 N 0.000
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.000
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.000
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.000
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.000
GLYMA11G36930 Glycine max GLYMA11G36930 N 0.000
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.000
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.000
Lus10011352.g Linum usitatissimum Lus10011352.g N 0.000
MDP0000262800 Malus domestica MDP0000262800 N 0.000
MTR_3g085050 Medicago truncatula MTR_3g085050 N 0.000
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.000
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.000
PK06349.1 Cannabis sativa PK06349.1 N 0.000
Pm007031 Prunus mume Pm007031 N 0.000
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.000
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N 0.000
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.000
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N 0.000
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.000
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.000
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.000
TCM_008731 Theobroma cacao TCM_008731 N 0.000
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.000