XBP1 (Sorex araneus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSARG00000002418 T061340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
XBP1
M02825_2.00
Homo sapiens
GVTGACGTCABB

VVTGACGTCABC
SELEX
Jolma et al.(2013)
XBP1_1
0.872 1.000
XBP1
M02826_2.00
Homo sapiens
GVTGACGTGKCVHW

WDBGMCACGTCABC
SELEX
Jolma et al.(2013)
XBP1_2
0.872 1.000
XBP1
M02730_2.00
Homo sapiens
GACGTGKCNNW

WNNGMCACGTC
SELEX
Jolma et al.(2010)
XBP1_monomer
0.872 1.000
XBP1
M04231_2.00
Homo sapiens
NVTGACGTGKNN

NNMCACGTCABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1
0.872 1.000
XBP1
M04232_2.00
Homo sapiens
NVTKACGTMABV

BVTKACGTMABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2
0.872 1.000
XBP1
M04010_2.00
Homo sapiens
GRTGACGTGKCV

BGMCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1
0.872 1.000
XBP1
M04011_2.00
Homo sapiens
GRTGACGTCAYS

SRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2
0.872 1.000
XBP1
M04012_2.00
Homo sapiens
KGMCACGTGKMCH

DGKMCACGTGKCM
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3
0.872 1.000
XBP1
M09932_2.00
Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB

VDHHWDNDMCACGTCABYDHWNDN
Transfac
Matys et al.(2006)
V$HTF_01
0.872 1.000
XBP1
M09933_2.00
Homo sapiens
DBRHTKACGTGKHNHWD

HWDNDMCACGTMADYVH
Transfac
Matys et al.(2006)
V$XBP1_01
0.872 1.000
XBP1
M04233_2.00
Homo sapiens
BKMCACRTCAYS

SRTGAYGTGKMV
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1
0.872 1.000
XBP1
M04234_2.00
Homo sapiens
VVTGWCRTCAYS

SRTGAYGWCABB
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2
0.872 1.000
Xbp1
M00757_2.00
Mus musculus
NNHBAYDNNN

NNNHRTVDNN
PBM
Weirauch et al.(2013)
pTH2852
0.872 0.969
Xbp1
M01802_2.00
Mus musculus
NHNACGYNN

NNRCGTNDN
PBM
Weirauch et al.(2014)
pTH5019
0.872 0.969
Xbp1
M08818_2.00
Mus musculus
GACGTGKCMHWD

HWDKGMCACGTC
Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C
0.872 0.969
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000002172 bZIP 70 133

Links

Other bZIP family TFs
Other Sorex araneus TFs

Invalid Input OrderBy

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action