CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DBP
(
Sus scrofa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSSSCG00000003148
T061414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dbp
M00762_2.00
Mus musculus
NVTTRYVHVW
WBDBRYAABN
PBM
Weirauch et al.(2013)
pTH3831
0.881
1.000
Dbp
M01820_2.00
Mus musculus
NNWWACRTAANNN
NNNTTAYGTWWNN
PBM
Weirauch et al.(2014)
pTH4377
0.881
1.000
DBP
M02827_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Jolma et al.(2013)
DBP_1
0.881
1.000
DBP
M02828_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
DBP_2
0.881
1.000
Dbp
M02868_2.00
Mus musculus
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Jolma et al.(2013)
Dbp_1
0.881
1.000
DBP
M04235_2.00
Homo sapiens
NVTTACRTAABN
NVTTAYGTAABN
SELEX
Yin et al.(2017)
DBP_eDBD_HT-SELEX
0.881
1.000
DBP
M04237_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
DBP_FL_HT-SELEX
0.881
1.000
DBP
M04013_2.00
Homo sapiens
RTKACGTAAY
RTTACGTMAY
SELEX
Rodriguez-Martinez et al.(2017)
DBP.1
0.881
1.000
DBP
M08785_2.00
Homo sapiens
VTTRTGYAABN
NVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
DBP_HUMAN.H11MO.0.B
0.881
1.000
Dbp
M08844_2.00
Mus musculus
VTTRTGYAABN
NVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
DBP_MOUSE.H11MO.0.B
0.881
1.000
DBP
M09934_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DBP_Q6_01
0.881
1.000
DBP
M09935_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DBP_Q6_02
0.881
1.000
DBP
M09936_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DBP_Q6
0.881
1.000
DBP
M04236_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Yin et al.(2017)
DBP_eDBD_Methyl-HT-SELEX
0.881
1.000
DBP
M04238_2.00
Homo sapiens
NRTTACRTAAYV
BRTTAYGTAAYN
SELEX
Yin et al.(2017)
DBP_FL_Methyl-HT-SELEX
0.881
1.000
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000003411
bZIP
253
313
QKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRA
Links
Other
bZIP
family TFs
Other
Sus scrofa
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_071470
Schistosoma mansoni
Smp_071470
N
0.000
HNAJ_0001194701
Hymenolepis nana
HNAJ_0001194701
N
0.000
MCOS_0000935301
Mesocestoides corti
MCOS_0000935301
N
0.000
SCUD_0000084401
Schistosoma curassoni
SCUD_0000084401
N
0.000
SMRZ_0000919701
Schistosoma margrebowiei
SMRZ_0000919701
N
0.000
SMTD_0001307301
Schistosoma mattheei
SMTD_0001307301
N
0.000
SPER_0000431501
Spirometra erinaceieuropaei
SPER_0000431501
N
0.000
SROB_0001708801
Schistosoma rodhaini
SROB_0001708801
N
0.000
SSLN_0000254501
Schistocephalus solidus
SSLN_0000254501
N
0.000
T265_13483
Opisthorchis viverrini
T265_13483
N
0.000
TASK_0000056801
Taenia asiatica
TASK_0000056801
N
0.000
HmN_000016600
Hymenolepis microstoma
HmN_000016600
N
0.000
HDID_0000204701
Hymenolepis diminuta
HDID_0000204701
N
0.000
Sjc_0076100
Schistosoma japonicum
Sjc_0076100
N
0.000
SMU15000947
Schmidtea mediterranea
SMU15000947
N
0.000
SMU15013779
Schmidtea mediterranea
SMU15013779
N
0.000
A_02126
Schistosoma haematobium
A_02126
N
0.000
csin101282
Clonorchis sinensis
csin101282
N
0.000
D915_00851
Fasciola hepatica
D915_00851
N
0.000
DILT_0000341901
Diphyllobothrium latum
DILT_0000341901
N
0.000
ECANG7_00676
Echinococcus canadensis
ECANG7_00676
N
0.000
ECPE_0000694101
Echinostoma caproni
ECPE_0000694101
N
0.000
EmuJ_000101100
Echinococcus multilocularis
EmuJ_000101100
N
0.000
TTAC_0000784401
Hydatigera taeniaeformis
TTAC_0000784401
N
0.000