CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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vri
(
Drosophila melanogaster
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
FBgn0016076
T062074_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific. Involved in several processes, including animal organ morphogenesis; multicellular organism aging; and positive regulation of heart contraction. Located in nucleus. Is expressed in several structures, including digestive system; dorsal closure embryo; epithelium; head; and pacemaker neurons. Orthologous to human NFIL3 (nuclear factor, interleukin 3 regulated). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vri
M03644_2.00
Drosophila melanogaster
RTKRYGTAAY
RTTACRYMAY
SELEX
Nitta et al.(2015)
vri_1
(Direct)
(Direct)
vri
M06023_2.00
Drosophila melanogaster
KRTTAYGTAAK
MTTACRTAAYM
B1H
Zhu et al.(2011)
vri_SANGER_5_FBgn0016076
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0078705
bZIP
124
175
WDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNI
FBpp0078705
bZIP
579
609
NVVTSAERDQMLKSQLERLESEVASIKMILA
FBpp0078706
bZIP
243
294
WDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNI
FBpp0078706
bZIP
699
728
VVTSAERDQMLKSQLERLESEVASIKMILA
FBpp0289297
bZIP
243
294
WDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNI
FBpp0289297
bZIP
699
728
VVTSAERDQMLKSQLERLESEVASIKMILA
FBpp0309715
bZIP
124
175
WDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNI
FBpp0309715
bZIP
579
609
NVVTSAERDQMLKSQLERLESEVASIKMILA
FBpp0312171
bZIP
243
294
WDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNI
FBpp0312171
bZIP
699
728
VVTSAERDQMLKSQLERLESEVASIKMILA
Links
Other
bZIP
family TFs
Other
Drosophila melanogaster
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy