CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BZIP27
(
Arabidopsis lyrata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
fgenesh1_pg.C_scaffold_3003160
T062338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.793
0.603
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_3003160
bZIP
117
181
SRGDRRYKRMIKNRESAARSRARKQECAYTNELELEIAHLQTENARLKIQQDQTSSSSSQLISAL
Links
Other
bZIP
family TFs
Other
Arabidopsis lyrata
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10006580m.g
Capsella rubella
Carubv10006580m.g
I
0.833
Thhalv10023128m.g
Eutrema salsugineum
Thhalv10023128m.g
N
0.806
PK24978.1
Cannabis sativa
PK24978.1
D
0.793
MTR_7g015990
Medicago truncatula
MTR_7g015990
N
0.789
Cla009066
Citrullus lanatus
Cla009066
I
0.786
gene14556-v1.0-hybrid
Fragaria vesca
gene14556-v1.0-hybrid
I
0.784
Gorai.007G191800
Gossypium raimondii
Gorai.007G191800
I
0.784
TCM_000152
Theobroma cacao
TCM_000152
I
0.783
MDP0000169473
Malus domestica
MDP0000169473
N
0.783