fgenesh_masked-piw_contig_88-abinit-gene-0.43 (Pythium iwayamai)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 fgenesh_masked-piw_contig_88-abinit-gene-0.43 T062393_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of DNA. The encoded protein combines with other tumor suppressors, DNA damage sensors, and signal transducers to form a large multi-subunit protein complex known as the BRCA1-associated genome surveillance complex (BASC). This gene product associates with RNA polymerase II, and through the C-terminal domain, also interacts with histone deacetylase complexes. This protein thus plays a role in transcription, DNA repair of double-stranded breaks, and recombination. Mutations in this gene are responsible for approximately 40% of inherited breast cancers and more than 80% of inherited breast and ovarian cancers. Alternative splicing plays a role in modulating the subcellular localization and physiological function of this gene. Many alternatively spliced transcript variants, some of which are disease-associated mutations, have been described for this gene, but the full-length natures of only some of these variants has been described. A related pseudogene, which is also located on chromosome 17, has been identified. [provided by RefSeq, May 2020]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPW00000014667 bZIP 235 282

Links

Other bZIP family TFs
Other Pythium iwayamai TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
maker-pve_contig_855-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_855-fgenesh-gene-0.1 N 0.849
maker-pir_contig_219-fgenesh-gene-0.10 Pythium irregulare maker-pir_contig_219-fgenesh-gene-0.10 N 0.849
fgenesh_scip_prom.46568.10829 Phytophthora kernoviae fgenesh_scip_prom.46568.10829 N 0.849
PITG_09816 Phytophthora infestans PITG_09816 N 0.841
estExt_fgenesh1_kg.C_30200002 Phytophthora capsici estExt_fgenesh1_kg.C_30200002 N 0.841
Physo127334 Phytophthora sojae Physo127334 N 0.841
Phyra84742 Phytophthora ramorum Phyra84742 N 0.841
F443_05590 Phytophthora parasitica F443_05590 N 0.841
HpaG808968 Hyaloperonospora arabidopsidis HpaG808968 N 0.834
PYU1_G001927 Pythium ultimum PYU1_G001927 N 0.822
maker-par_contig_1598-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1598-fgenesh-gene-0.1 N 0.822
maker-pag1_scaffold_161-snap-gene-0.10 Pythium aphanidermatum maker-pag1_scaffold_161-snap-gene-0.10 N 0.806