CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA03G18990
(
Glycine max
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GLYMA03G18990
T062894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HYH
M01132_2.00
Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN
PBM
Lambert et al.(2019)
pTH9959
0.782
0.797
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA03G18990.1
bZIP
108
174
DKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMQDKNAILEERISTLINENTMLRKVLMNAR
GLYMA03G18990.2
bZIP
107
173
DKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMQDKNAILEERISTLINENTMLRKVLMNAR
Links
Other
bZIP
family TFs
Other
Glycine max
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy