CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR01G32640
(
Leersia perrieri
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
LPERR01G32640
T064141_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.783
0.840
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.783
0.840
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.783
0.840
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G32640.1
bZIP
220
269
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
LPERR01G32640.2
bZIP
220
269
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
LPERR01G32640.3
bZIP
159
208
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
LPERR01G32640.4
bZIP
220
269
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
LPERR01G32640.5
bZIP
102
151
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
LPERR01G32640.6
bZIP
102
151
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
Links
Other
bZIP
family TFs
Other
Leersia perrieri
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy