CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g054900
(
Medicago truncatula
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
MTR_5g054900
T064994_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA
TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.784
0.863
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.783
0.894
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.784
0.843
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.784
0.843
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.783
0.894
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.784
0.843
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.783
0.894
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.784
0.843
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN
NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.784
0.843
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.784
0.843
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.784
0.843
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.784
0.843
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.784
0.843
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.784
0.843
TGA2
M09917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.784
0.843
TGA2
M09918_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.784
0.843
HBP1B_WHEAT
M10043_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.784
0.824
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES97469
bZIP
145
195
AEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRVREQ
KEH27969
bZIP
175
221
AEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQR
KEH27970
bZIP
64
110
AEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQR
KEH27971
bZIP
64
114
AEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRVREQ
Links
Other
bZIP
family TFs
Other
Medicago truncatula
TFs
181 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G21120
Glycine max
GLYMA01G21120
I
0.790
GLYMA02G10833
Glycine max
GLYMA02G10833
I
0.790
AMTR_s00095p00059370
Amborella trichopoda
AMTR_s00095p00059370
I
0.787
AMTR_s00010p00030830
Amborella trichopoda
AMTR_s00010p00030830
I
0.787
Aquca_004_00791
Aquilegia coerulea
Aquca_004_00791
I
0.784
Aquca_009_00424
Aquilegia coerulea
Aquca_009_00424
I
0.784
mgf005858m
Mimulus guttatus
mgf005858m
I
0.784
Cucsa.337740
Cucumis sativus
Cucsa.337740
I
0.784
Cucsa.005120
Cucumis sativus
Cucsa.005120
I
0.784
Cucsa.307820
Cucumis sativus
Cucsa.307820
I
0.784
Bostr.13129s0278
Boechera stricta
Bostr.13129s0278
I
0.784
Cagra.0430s0055
Capsella grandiflora
Cagra.0430s0055
I
0.784
Carubv10001413m.g
Capsella rubella
Carubv10001413m.g
I
0.784
Ciclev10001081m.g
Citrus clementina
Ciclev10001081m.g
I
0.784
Ciclev10005080m.g
Citrus clementina
Ciclev10005080m.g
I
0.784
Carubv10001409m.g
Capsella rubella
Carubv10001409m.g
I
0.784
Cagra.16209s0004
Capsella grandiflora
Cagra.16209s0004
I
0.784
Bostr.3640s0002
Boechera stricta
Bostr.3640s0002
I
0.784
cassava6928.valid.m1
Manihot esculenta
cassava6928.valid.m1
I
0.784
Cagra.16209s0003
Capsella grandiflora
Cagra.16209s0003
I
0.784
Bostr.13129s0279
Boechera stricta
Bostr.13129s0279
I
0.784
cassava35768.valid.m1
Manihot esculenta
cassava35768.valid.m1
I
0.784
Cla002918
Citrullus lanatus
Cla002918
I
0.784
Cla010092
Citrullus lanatus
Cla010092
I
0.784
Cla022393
Citrullus lanatus
Cla022393
I
0.784
Ca_17971
Cicer arietinum
Ca_17971
I
0.784
Ca_10901
Cicer arietinum
Ca_10901
I
0.784
VIT_08s0007g05170
Vitis vinifera
VIT_08s0007g05170
I
0.784
VIT_13s0084g00660
Vitis vinifera
VIT_13s0084g00660
I
0.784
Ca_07170
Cicer arietinum
Ca_07170
I
0.784
Pm016643
Prunus mume
Pm016643
I
0.784
Pm028917
Prunus mume
Pm028917
I
0.784
cassava22236.valid.m1
Manihot esculenta
cassava22236.valid.m1
I
0.784
cassava22237.valid.m1
Manihot esculenta
cassava22237.valid.m1
I
0.784
Eucgr.A02240
Eucalyptus grandis
Eucgr.A02240
I
0.784
cassava1427.valid.m1
Manihot esculenta
cassava1427.valid.m1
I
0.784
cassava1426.valid.m1
Manihot esculenta
cassava1426.valid.m1
I
0.784
Pm029028
Prunus mume
Pm029028
I
0.784
28883.m000741
Ricinus communis
28883.m000741
I
0.784
30131.m007163
Ricinus communis
30131.m007163
I
0.784
cassava43322.valid.m1
Manihot esculenta
cassava43322.valid.m1
I
0.784
Eucgr.K01643
Eucalyptus grandis
Eucgr.K01643
I
0.784
Pavir.Bb03716
Panicum virgatum
Pavir.Bb03716
I
0.784
Pavir.Eb01160
Panicum virgatum
Pavir.Eb01160
I
0.784
SapurV1A.0009s1200
Salix purpurea
SapurV1A.0009s1200
I
0.784
Pavir.Ba00294
Panicum virgatum
Pavir.Ba00294
I
0.784
orange1.1g045786m.g
Citrus sinensis
orange1.1g045786m.g
I
0.784
MDP0000320524
Malus domestica
MDP0000320524
I
0.784
MDP0000536881
Malus domestica
MDP0000536881
I
0.784
orange1.1g015258m.g
Citrus sinensis
orange1.1g015258m.g
I
0.784
SapurV1A.0079s0330
Salix purpurea
SapurV1A.0079s0330
I
0.784
SapurV1A.0189s0240
Salix purpurea
SapurV1A.0189s0240
I
0.784
PK09021.1
Cannabis sativa
PK09021.1
D
0.784
PK13754.1
Cannabis sativa
PK13754.1
I
0.784
chr1.CM0009.80.nd
Lotus japonicus
chr1.CM0009.80.nd
I
0.784
PK08582.1
Cannabis sativa
PK08582.1
I
0.784
Thhalv10021187m.g
Eutrema salsugineum
Thhalv10021187m.g
I
0.784
SapurV1A.0196s0260
Salix purpurea
SapurV1A.0196s0260
I
0.784
SapurV1A.0574s0080
Salix purpurea
SapurV1A.0574s0080
I
0.784
Thhalv10014082m.g
Eutrema salsugineum
Thhalv10014082m.g
I
0.784
MDP0000301884
Malus domestica
MDP0000301884
I
0.784
MDP0000300532
Malus domestica
MDP0000300532
I
0.784
gene21882-v1.0-hybrid
Fragaria vesca
gene21882-v1.0-hybrid
I
0.784
Gorai.007G352600
Gossypium raimondii
Gorai.007G352600
I
0.784
Gorai.008G185000
Gossypium raimondii
Gorai.008G185000
I
0.784
gene14220-v1.0-hybrid
Fragaria vesca
gene14220-v1.0-hybrid
I
0.784
evm.TU.supercontig_847.1
Carica papaya
evm.TU.supercontig_847.1
I
0.784
PAN
Vitis vinifera
VIT_01s0011g03230
I
0.784
evm.TU.supercontig_1.202
Carica papaya
evm.TU.supercontig_1.202
I
0.784
evm.TU.supercontig_5.165
Carica papaya
evm.TU.supercontig_5.165
I
0.784
Gorai.011G217200
Gossypium raimondii
Gorai.011G217200
I
0.784
Gorai.013G001700
Gossypium raimondii
Gorai.013G001700
I
0.784
MDP0000145555
Malus domestica
MDP0000145555
I
0.784
MDP0000250967
Malus domestica
MDP0000250967
I
0.784
MDP0000262210
Malus domestica
MDP0000262210
I
0.784
Lus10026166.g
Linum usitatissimum
Lus10026166.g
I
0.784
Lus10024140.g
Linum usitatissimum
Lus10024140.g
I
0.784
Gorai.013G081100
Gossypium raimondii
Gorai.013G081100
I
0.784
Lus10008658.g
Linum usitatissimum
Lus10008658.g
I
0.784
Eucgr.G03217
Eucalyptus grandis
Eucgr.G03217
I
0.784
Cla008107
Citrullus lanatus
Cla008107
I
0.784
GRMZM2G030280
Zea mays
GRMZM2G030280
I
0.784
GRMZM2G361847
Zea mays
GRMZM2G361847
I
0.784
GSMUA_Achr10G00340_001
Musa acuminata
GSMUA_Achr10G00340_001
I
0.784
GLYMA20G39050
Glycine max
GLYMA20G39050
I
0.784
GLYMA20G24766
Glycine max
GLYMA20G24766
I
0.784
GLYMA13G26280
Glycine max
GLYMA13G26280
I
0.784
GLYMA15G37220
Glycine max
GLYMA15G37220
I
0.784
GLYMA19G31050
Glycine max
GLYMA19G31050
I
0.784
GSMUA_Achr11G25140_001
Musa acuminata
GSMUA_Achr11G25140_001
I
0.784
GSMUA_Achr3G25020_001
Musa acuminata
GSMUA_Achr3G25020_001
I
0.784
MTR_8g040120
Medicago truncatula
MTR_8g040120
I
0.784
OB01G21470
Oryza brachyantha
OB01G21470
I
0.784
OB07G32440
Oryza brachyantha
OB07G32440
I
0.784
MTR_7g089800
Medicago truncatula
MTR_7g089800
I
0.784
LPERR07G23730
Leersia perrieri
LPERR07G23730
I
0.784
GSMUA_Achr8G05800_001
Musa acuminata
GSMUA_Achr8G05800_001
I
0.784
HBP1B_WHEAT
Triticum aestivum
HBP1B_WHEAT
D
0.784
TRAES3BF003000030CFD_g
Triticum aestivum
TRAES3BF003000030CFD_g
I
0.784
GLYMA10G42280
Glycine max
GLYMA10G42280
I
0.784
GLYMA03G28320
Glycine max
GLYMA03G28320
I
0.784
Bo1g139470
Brassica oleracea
Bo1g139470
I
0.784
Bo2g007460
Brassica oleracea
Bo2g007460
I
0.784
Bo3g064830
Brassica oleracea
Bo3g064830
I
0.784
BGIOSGA026428
Oryza indica
BGIOSGA026428
I
0.784
BGIOSGA003265
Oryza indica
BGIOSGA003265
I
0.784
TGA6
Arabidopsis thaliana
AT3G12250
D
0.784
TGA2
Arabidopsis thaliana
AT5G06950
D
0.784
TGA5
Arabidopsis thaliana
AT5G06960
D
0.784
Bo5g133550
Brassica oleracea
Bo5g133550
I
0.784
Bo9g175710
Brassica oleracea
Bo9g175710
I
0.784
BRADI2G10830
Brachypodium distachyon
BRADI2G10830
I
0.784
TGA6
Arabidopsis lyrata
fgenesh2_kg.3__1288__AT3G12250.4
I
0.784
OBF5
Arabidopsis lyrata
fgenesh2_kg.6__648__AT5G06960.1
I
0.784
Bra038705
Brassica rapa
Bra038705
I
0.784
Bra034767
Brassica rapa
Bra034767
I
0.784
Bra001443
Brassica rapa
Bra001443
I
0.784
Bra009241
Brassica rapa
Bra009241
I
0.784
Bra028713
Brassica rapa
Bra028713
I
0.784
OBART01G11380
Oryza barthii
OBART01G11380
I
0.784
LPERR01G10700
Leersia perrieri
LPERR01G10700
I
0.784
PAN
Populus trichocarpa
POPTR_0008s11710
I
0.784
OBART07G26940
Oryza barthii
OBART07G26940
I
0.784
PRUPE_ppa005279mg
Prunus persica
PRUPE_ppa005279mg
I
0.784
POPTR_0006s03720
Populus trichocarpa
POPTR_0006s03720
I
0.784
POPTR_0003s19410
Populus trichocarpa
POPTR_0003s19410
I
0.784
PGSC0003DMG400009449
Solanum tuberosum
PGSC0003DMG400009449
I
0.784
PGSC0003DMG400012962
Solanum tuberosum
PGSC0003DMG400012962
I
0.784
POPTR_0001s06700
Populus trichocarpa
POPTR_0001s06700
I
0.784
PRUPE_ppa019842mg
Prunus persica
PRUPE_ppa019842mg
I
0.784
Sb02g043480
Sorghum bicolor
Sb02g043480
I
0.784
TCM_011845
Theobroma cacao
TCM_011845
I
0.784
TCM_023491
Theobroma cacao
TCM_023491
I
0.784
TCM_023492
Theobroma cacao
TCM_023492
I
0.784
Solyc11g064950.1
Solanum lycopersicum
Solyc11g064950.1
I
0.784
Solyc05g009660.2
Solanum lycopersicum
Solyc05g009660.2
I
0.784
Sb03g006790
Sorghum bicolor
Sb03g006790
I
0.784
Si002195m.g
Setaria italica
Si002195m.g
I
0.784
TGA2.1
Oryza sativa
OS07G0687700
I
0.784
POPTR_0016s03590
Populus trichocarpa
POPTR_0016s03590
I
0.784
ORUFI01G12420
Oryza rufipogon
ORUFI01G12420
I
0.784
ORUFI07G27880
Oryza rufipogon
ORUFI07G27880
I
0.784
ORGLA07G0213300
Oryza glaberrima
ORGLA07G0213300
I
0.784
OPUNC01G11270
Oryza punctata
OPUNC01G11270
I
0.784
ONIVA01G13810
Oryza nivara
ONIVA01G13810
I
0.784
OPUNC07G25310
Oryza punctata
OPUNC07G25310
I
0.784
OLONG_021555
Oryza longistaminata
OLONG_021555
I
0.784
TGA2.3
Oryza sativa
OS01G0279900
I
0.784
ONIVA07G26680
Oryza nivara
ONIVA07G26680
I
0.784
Cla017796
Citrullus lanatus
Cla017796
I
0.783
Solyc06g074320.2
Solanum lycopersicum
Solyc06g074320.2
I
0.783
Bo8g112540
Brassica oleracea
Bo8g112540
I
0.783
Bo5g008940
Brassica oleracea
Bo5g008940
I
0.783
Carubv10011576m.g
Capsella rubella
Carubv10011576m.g
I
0.783
Cagra.4395s0022
Capsella grandiflora
Cagra.4395s0022
I
0.783
PK21698.1
Cannabis sativa
PK21698.1
I
0.783
TGA9
Arabidopsis thaliana
AT1G08320
D
0.783
TCM_024862
Theobroma cacao
TCM_024862
I
0.783
TGA10
Vitis vinifera
VIT_08s0007g06160
I
0.783
Thhalv10007490m.g
Eutrema salsugineum
Thhalv10007490m.g
I
0.783
Bostr.25219s0112
Boechera stricta
Bostr.25219s0112
I
0.783
SapurV1A.1761s0020
Salix purpurea
SapurV1A.1761s0020
I
0.783
Pm025995
Prunus mume
Pm025995
I
0.783
evm.TU.supercontig_85.93
Carica papaya
evm.TU.supercontig_85.93
I
0.783
mgf025345m
Mimulus guttatus
mgf025345m
I
0.783
29216.m000249
Ricinus communis
29216.m000249
I
0.783
gene00517-v1.0-hybrid
Fragaria vesca
gene00517-v1.0-hybrid
I
0.783
Cucsa.242870
Cucumis sativus
Cucsa.242870
I
0.783
Gorai.002G228200
Gossypium raimondii
Gorai.002G228200
I
0.783
Gorai.006G141000
Gossypium raimondii
Gorai.006G141000
I
0.783
fgenesh1_pm.C_scaffold_1000665
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1000665
I
0.783
PRUPE_ppa003825mg
Prunus persica
PRUPE_ppa003825mg
I
0.783
Gorai.001G122100
Gossypium raimondii
Gorai.001G122100
I
0.783
Bra018634
Brassica rapa
Bra018634
I
0.783
orange1.1g038233m.g
Citrus sinensis
orange1.1g038233m.g
I
0.783
Bra031622
Brassica rapa
Bra031622
I
0.783
MDP0000320322
Malus domestica
MDP0000320322
I
0.783
Aquca_009_00172
Aquilegia coerulea
Aquca_009_00172
I
0.783
MDP0000307943
Malus domestica
MDP0000307943
I
0.783
Ciclev10031361m.g
Citrus clementina
Ciclev10031361m.g
I
0.783