CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA04G25750
(
Oryza nivara
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ONIVA04G25750
T065813_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.783
0.778
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.783
0.778
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.783
0.778
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G25750.13
bZIP
187
236
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
ONIVA04G25750.1
bZIP
239
288
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
ONIVA04G25750.3
bZIP
187
236
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
ONIVA04G25750.4
bZIP
239
288
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQ
ONIVA04G25750.9
bZIP
187
240
VDAKTERRLAQNREAARKSRLRKKAYVQNLETSRVRLQQIEQELQRARSQQQLQ
Links
Other
bZIP
family TFs
Other
Oryza nivara
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy