CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400007523
(
Solanum tuberosum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
PGSC0003DMG400007523
T066487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.840
0.806
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.840
0.806
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN
NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.786
0.645
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG
CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.786
0.645
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400019465
bZIP
78
139
DERKKRRMISNRESARRSRMRKQRQLDELWSQVLRLRTENHNLIDKLNHVSECHDKVLQENS
Links
Other
bZIP
family TFs
Other
Solanum tuberosum
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g043159m.g
Citrus sinensis
orange1.1g043159m.g
I
0.874
Ciclev10032777m.g
Citrus clementina
Ciclev10032777m.g
I
0.874
PGSC0003DMG400001916
Solanum tuberosum
PGSC0003DMG400001916
I
0.860
GLYMA01G09510
Glycine max
GLYMA01G09510
I
0.860
cassava46237.m1
Manihot esculenta
cassava46237.m1
I
0.860
30138.m003866
Ricinus communis
30138.m003866
I
0.860
cassava32522.m1
Manihot esculenta
cassava32522.m1
I
0.860
POPTR_0008s11260
Populus trichocarpa
POPTR_0008s11260
I
0.860
chr2.CM0124.640.nd
Lotus japonicus
chr2.CM0124.640.nd
I
0.860
Solyc04g005170.1
Solanum lycopersicum
Solyc04g005170.1
I
0.860
SapurV1A.0060s0610
Salix purpurea
SapurV1A.0060s0610
I
0.858
POPTR_0010s14530
Populus trichocarpa
POPTR_0010s14530
I
0.858
SapurV1A.0084s0340
Salix purpurea
SapurV1A.0084s0340
I
0.854
MTR_7g029400
Medicago truncatula
MTR_7g029400
I
0.846
Gorai.001G251000
Gossypium raimondii
Gorai.001G251000
I
0.841
GLYMA02G13960
Glycine max
GLYMA02G13960
I
0.841
gene04504-v1.0-hybrid
Fragaria vesca
gene04504-v1.0-hybrid
I
0.841
VIT_01s0010g00930
Vitis vinifera
VIT_01s0010g00930
I
0.841
ATBZIP42
Arabidopsis thaliana
AT3G30530
D
0.840
Eucgr.I02090
Eucalyptus grandis
Eucgr.I02090
I
0.838
Cla020641
Citrullus lanatus
Cla020641
I
0.835
Cucsa.284240
Cucumis sativus
Cucsa.284240
I
0.835
Aquca_006_00360
Aquilegia coerulea
Aquca_006_00360
I
0.835
Cla005975
Citrullus lanatus
Cla005975
I
0.835
Thhalv10015835m.g
Eutrema salsugineum
Thhalv10015835m.g
I
0.830
Bra023540
Brassica rapa
Bra023540
I
0.830
Bra008670
Brassica rapa
Bra008670
I
0.829
Bo9g163740
Brassica oleracea
Bo9g163740
I
0.829
Lus10029101.g
Linum usitatissimum
Lus10029101.g
I
0.827
PRUPE_ppa011589mg
Prunus persica
PRUPE_ppa011589mg
I
0.827
Lus10013059.g
Linum usitatissimum
Lus10013059.g
I
0.827
Cucsa.174700
Cucumis sativus
Cucsa.174700
I
0.826
PRUPE_ppa011644mg
Prunus persica
PRUPE_ppa011644mg
I
0.826
Pm015434
Prunus mume
Pm015434
I
0.826
cassava9577.m1
Manihot esculenta
cassava9577.m1
I
0.826
Bo3g010620
Brassica oleracea
Bo3g010620
I
0.821
AtbZIP3
Arabidopsis lyrata
fgenesh2_kg.6__1562__AT5G15830.1
I
0.821
Carubv10002068m.g
Capsella rubella
Carubv10002068m.g
I
0.821
Bostr.2902s0318
Boechera stricta
Bostr.2902s0318
I
0.821
Bo2g012800
Brassica oleracea
Bo2g012800
I
0.821
Bra006324
Brassica rapa
Bra006324
I
0.819
Bo3g010750
Brassica oleracea
Bo3g010750
I
0.819
GLYMA19G05050
Glycine max
GLYMA19G05050
I
0.817
MDP0000891108
Malus domestica
MDP0000891108
I
0.817
MDP0000183562
Malus domestica
MDP0000183562
I
0.817
MDP0000863909
Malus domestica
MDP0000863909
I
0.817
Cagra.6845s0027
Capsella grandiflora
Cagra.6845s0027
I
0.816
mgf021986m
Mimulus guttatus
mgf021986m
I
0.814
Ca_09362
Cicer arietinum
Ca_09362
I
0.814
Solyc03g046440.1
Solanum lycopersicum
Solyc03g046440.1
I
0.812
mgf017392m
Mimulus guttatus
mgf017392m
I
0.812
Si019897m.g
Setaria italica
Si019897m.g
I
0.810
Cucsa.238410
Cucumis sativus
Cucsa.238410
I
0.810
Cla016748
Citrullus lanatus
Cla016748
I
0.810
GLYMA11G04920
Glycine max
GLYMA11G04920
I
0.806
GLYMA01G40370
Glycine max
GLYMA01G40370
I
0.806
GLYMA17G17100
Glycine max
GLYMA17G17100
I
0.806
MTR_5g015090
Medicago truncatula
MTR_5g015090
I
0.805
chr2.CM0021.50.nd
Lotus japonicus
chr2.CM0021.50.nd
I
0.805
Lus10011722.g
Linum usitatissimum
Lus10011722.g
I
0.804
GRMZM2G020799
Zea mays
GRMZM2G020799
I
0.803
GSMUA_Achr6G36230_001
Musa acuminata
GSMUA_Achr6G36230_001
I
0.803
MTR_8g015250
Medicago truncatula
MTR_8g015250
I
0.803
cassava35454.valid.m1
Manihot esculenta
cassava35454.valid.m1
I
0.803
Pavir.Bb02514
Panicum virgatum
Pavir.Bb02514
I
0.802
Si031238m.g
Setaria italica
Si031238m.g
I
0.802
Pavir.Ba01782
Panicum virgatum
Pavir.Ba01782
I
0.801
Aquca_006_00040
Aquilegia coerulea
Aquca_006_00040
I
0.798
Traes_6AL_E0ED0DE45
Triticum aestivum
Traes_6AL_E0ED0DE45
I
0.794
Traes_6DL_77ACE1279
Triticum aestivum
Traes_6DL_77ACE1279
I
0.794
MLOC_62430
Hordeum vulgare
MLOC_62430
I
0.794
mgf003466m
Mimulus guttatus
mgf003466m
I
0.794
Eucgr.H02330
Eucalyptus grandis
Eucgr.H02330
I
0.793
cassava41140.m1
Manihot esculenta
cassava41140.m1
I
0.793
Ciclev10027584m.g
Citrus clementina
Ciclev10027584m.g
I
0.792
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.792
cassava24775.valid.m1
Manihot esculenta
cassava24775.valid.m1
I
0.792
Pm002353
Prunus mume
Pm002353
I
0.792
30131.m007078
Ricinus communis
30131.m007078
I
0.792
orange1.1g029952m.g
Citrus sinensis
orange1.1g029952m.g
I
0.792
PRUPE_ppa011366mg
Prunus persica
PRUPE_ppa011366mg
I
0.792
MTR_4g097440
Medicago truncatula
MTR_4g097440
I
0.792
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.792
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.792
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.792
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.792
Gorai.003G032100
Gossypium raimondii
Gorai.003G032100
I
0.791
Cla008074
Citrullus lanatus
Cla008074
I
0.791
Ca_15971
Cicer arietinum
Ca_15971
N
0.791
TCM_000835
Theobroma cacao
TCM_000835
I
0.791
ONIVA09G14270
Oryza nivara
ONIVA09G14270
I
0.790
OPUNC09G12140
Oryza punctata
OPUNC09G12140
I
0.790
OBART09G13760
Oryza barthii
OBART09G13760
I
0.790
OBART09G13750
Oryza barthii
OBART09G13750
I
0.790
OB09G20300
Oryza brachyantha
OB09G20300
I
0.790
LPERR09G10020
Leersia perrieri
LPERR09G10020
I
0.790
OGLUM09G14340
Oryza glumaepatula
OGLUM09G14340
I
0.790
OLONG_013604
Oryza longistaminata
OLONG_013604
I
0.790
OPUNC09G12240
Oryza punctata
OPUNC09G12240
I
0.790
BGIOSGA029595
Oryza indica
BGIOSGA029595
I
0.790
ORGLA09G0104900
Oryza glaberrima
ORGLA09G0104900
I
0.790
OS09G0474000
Oryza sativa
OS09G0474000
I
0.790
ORUFI09G14730
Oryza rufipogon
ORUFI09G14730
I
0.790
BRADI4G32920
Brachypodium distachyon
BRADI4G32920
I
0.789
OGLUM08G19690
Oryza glumaepatula
OGLUM08G19690
I
0.788
OS08G0487100
Oryza sativa
OS08G0487100
I
0.788
BGIOSGA026766
Oryza indica
BGIOSGA026766
I
0.788
OBART08G18720
Oryza barthii
OBART08G18720
I
0.788
BRADI3G56290
Brachypodium distachyon
BRADI3G56290
I
0.788
MDP0000891899
Malus domestica
MDP0000891899
I
0.788
ONIVA08G20730
Oryza nivara
ONIVA08G20730
I
0.788
ORGLA08G0162900
Oryza glaberrima
ORGLA08G0162900
I
0.788
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.788
OMERI08G14760
Oryza meridionalis
OMERI08G14760
I
0.788
LPERR08G15570
Leersia perrieri
LPERR08G15570
I
0.788
ORUFI08G08020
Oryza rufipogon
ORUFI08G08020
I
0.788
gw1.83.117.1
Physcomitrella patens
gw1.83.117.1
I
0.787
BGIOSGA008968
Oryza indica
BGIOSGA008968
I
0.786
OMERI02G29910
Oryza meridionalis
OMERI02G29910
I
0.786
OBART02G31030
Oryza barthii
OBART02G31030
I
0.786
OPUNC02G28720
Oryza punctata
OPUNC02G28720
I
0.786
ORGLA02G0265300
Oryza glaberrima
ORGLA02G0265300
I
0.786
ORUFI02G32700
Oryza rufipogon
ORUFI02G32700
I
0.786
POPTR_0007s14740
Populus trichocarpa
POPTR_0007s14740
I
0.786
ONIVA02G34180
Oryza nivara
ONIVA02G34180
I
0.786
OLONG_004835
Oryza longistaminata
OLONG_004835
I
0.786
OS02G0728001
Oryza sativa
OS02G0728001
D
0.786
OGLUM02G31690
Oryza glumaepatula
OGLUM02G31690
I
0.786
Sb02g027410
Sorghum bicolor
Sb02g027410
I
0.785
orange1.1g044691m.g
Citrus sinensis
orange1.1g044691m.g
I
0.784
Ciclev10029834m.g
Citrus clementina
Ciclev10029834m.g
I
0.784
GRMZM2G144480
Zea mays
GRMZM2G144480
I
0.784
POPTR_0004s16560
Populus trichocarpa
POPTR_0004s16560
I
0.783