PGSC0003DMG400007523 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400007523 T066487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.840 0.806
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.840 0.806
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.786 0.645
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.786 0.645
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400019465 bZIP 78 139

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.874
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.874
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.860
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.860
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.860
30138.m003866 Ricinus communis 30138.m003866 I 0.860
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.860
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.860
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.860
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.860
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.858
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.858
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.854
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.846
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.841
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.841
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.841
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.841
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.840
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.838
Cla020641 Citrullus lanatus Cla020641 I 0.835
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.835
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.835
Cla005975 Citrullus lanatus Cla005975 I 0.835
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.830
Bra023540 Brassica rapa Bra023540 I 0.830
Bra008670 Brassica rapa Bra008670 I 0.829
Bo9g163740 Brassica oleracea Bo9g163740 I 0.829
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.827
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.827
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.827
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.826
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.826
Pm015434 Prunus mume Pm015434 I 0.826
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.826
Bo3g010620 Brassica oleracea Bo3g010620 I 0.821
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.821
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.821
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.821
Bo2g012800 Brassica oleracea Bo2g012800 I 0.821
Bra006324 Brassica rapa Bra006324 I 0.819
Bo3g010750 Brassica oleracea Bo3g010750 I 0.819
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.817
MDP0000891108 Malus domestica MDP0000891108 I 0.817
MDP0000183562 Malus domestica MDP0000183562 I 0.817
MDP0000863909 Malus domestica MDP0000863909 I 0.817
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.816
mgf021986m Mimulus guttatus mgf021986m I 0.814
Ca_09362 Cicer arietinum Ca_09362 I 0.814
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.812
mgf017392m Mimulus guttatus mgf017392m I 0.812
Si019897m.g Setaria italica Si019897m.g I 0.810
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.810
Cla016748 Citrullus lanatus Cla016748 I 0.810
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.806
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.806
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.806
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.805
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.805
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.804
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.803
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I 0.803
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.803
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.803
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.802
Si031238m.g Setaria italica Si031238m.g I 0.802
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.801
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.798
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.794
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.794
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.794
mgf003466m Mimulus guttatus mgf003466m I 0.794
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.793
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.793
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.792
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.792
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.792
Pm002353 Prunus mume Pm002353 I 0.792
30131.m007078 Ricinus communis 30131.m007078 I 0.792
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.792
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.792
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.792
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.792
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.792
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.792
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.792
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.791
Cla008074 Citrullus lanatus Cla008074 I 0.791
Ca_15971 Cicer arietinum Ca_15971 N 0.791
TCM_000835 Theobroma cacao TCM_000835 I 0.791
ONIVA09G14270 Oryza nivara ONIVA09G14270 I 0.790
OPUNC09G12140 Oryza punctata OPUNC09G12140 I 0.790
OBART09G13760 Oryza barthii OBART09G13760 I 0.790
OBART09G13750 Oryza barthii OBART09G13750 I 0.790
OB09G20300 Oryza brachyantha OB09G20300 I 0.790
LPERR09G10020 Leersia perrieri LPERR09G10020 I 0.790
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I 0.790
OLONG_013604 Oryza longistaminata OLONG_013604 I 0.790
OPUNC09G12240 Oryza punctata OPUNC09G12240 I 0.790
BGIOSGA029595 Oryza indica BGIOSGA029595 I 0.790
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I 0.790
OS09G0474000 Oryza sativa OS09G0474000 I 0.790
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I 0.790
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.789
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.788
OS08G0487100 Oryza sativa OS08G0487100 I 0.788
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.788
OBART08G18720 Oryza barthii OBART08G18720 I 0.788
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.788
MDP0000891899 Malus domestica MDP0000891899 I 0.788
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.788
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.788
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.788
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.788
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.788
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.788
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.787
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.786
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.786
OBART02G31030 Oryza barthii OBART02G31030 I 0.786
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.786
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.786
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.786
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.786
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.786
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.786
OS02G0728001 Oryza sativa OS02G0728001 D 0.786
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.786
Sb02g027410 Sorghum bicolor Sb02g027410 I 0.785
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.784
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.784
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.784
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.783