PGSC0003DMG400029774 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400029774 T066524_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.788 0.559
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.788 0.559
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.788 0.524
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.788 0.524
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.788 0.524
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400076576 bZIP 200 262
PGSC0003DMT400076577 bZIP 200 258

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I 0.885
TCM_006432 Theobroma cacao TCM_006432 I 0.873
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.873
MDP0000706379 Malus domestica MDP0000706379 I 0.873
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.873
mgf009464m Mimulus guttatus mgf009464m N 0.862
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.850
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.848
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N 0.846
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.841
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.832
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.826
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I 0.826
Pm004043 Prunus mume Pm004043 I 0.824
MDP0000198495 Malus domestica MDP0000198495 I 0.824
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I 0.824
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.824
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I 0.822
Cla000389 Citrullus lanatus Cla000389 I 0.821
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.818
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.817
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.817
29955.m001177 Ricinus communis 29955.m001177 I 0.815
MDP0000208334 Malus domestica MDP0000208334 N 0.814
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.813
chr6.CM0314.840.nd Lotus japonicus chr6.CM0314.840.nd N 0.804
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.803
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.801
Bra007274 Brassica rapa Bra007274 I 0.799
Bra007276 Brassica rapa Bra007276 I 0.799
Bra014668 Brassica rapa Bra014668 I 0.799
Bra003253 Brassica rapa Bra003253 I 0.799
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.799
Bo4g112690 Brassica oleracea Bo4g112690 I 0.799
Bo6g072380 Brassica oleracea Bo6g072380 I 0.799
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.799
Bo8g091160 Brassica oleracea Bo8g091160 I 0.799
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.799
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.797
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.797
OS01G0859300 Oryza sativa OS01G0859300 I 0.797
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.797
OBART01G37980 Oryza barthii OBART01G37980 I 0.797
OB01G46760 Oryza brachyantha OB01G46760 I 0.797
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.797
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.797
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.797
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.797
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.797
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I 0.796
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.796
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.796
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.795
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.795
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.794
F775_32479 Aegilops tauschii F775_32479 I 0.794
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.794
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.794
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.794
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.793
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.793
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.793
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.793
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.793
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.793
GLYMA08G19590 Glycine max GLYMA08G19590 N 0.792
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.792
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.792
GLYMA15G05440 Glycine max GLYMA15G05440 N 0.791
Bo5g004230 Brassica oleracea Bo5g004230 N 0.791
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.791
Bra015281 Brassica rapa Bra015281 N 0.791
TCM_044596 Theobroma cacao TCM_044596 I 0.791
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.790
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.790
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.790
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.790
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.790
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.790
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.790
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.789
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.789
mgf020385m Mimulus guttatus mgf020385m N 0.789
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.789
mgf011003m Mimulus guttatus mgf011003m I 0.789
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.789
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.789
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.789
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.789
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N 0.789
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.789
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.789
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.788
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.788
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.788
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.788
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.788
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.788
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.788
DPBF3 Arabidopsis thaliana AT3G56850 D 0.788
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.788
Bra016953 Brassica rapa Bra016953 I 0.788
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.788
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.788
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.788
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.788
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.788
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.788
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.787
MDP0000273211 Malus domestica MDP0000273211 I 0.787
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.787
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.787
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.787
Pavir.J38875 Panicum virgatum Pavir.J38875 I 0.787
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.787
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.787
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.787
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.787
OB05G28440 Oryza brachyantha OB05G28440 I 0.787
Ca_23748 Cicer arietinum Ca_23748 I 0.787
OBART05G21000 Oryza barthii OBART05G21000 I 0.787
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.787
F775_17024 Aegilops tauschii F775_17024 I 0.787
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.787
OS05G0489700 Oryza sativa OS05G0489700 I 0.787
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.787
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I 0.787
Si002173m.g Setaria italica Si002173m.g I 0.787
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.787
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.787
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.787
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.786
OPUNC01G33790 Oryza punctata OPUNC01G33790 I 0.786
OPUNC07G25180 Oryza punctata OPUNC07G25180 I 0.786
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.786
ONIVA07G26520 Oryza nivara ONIVA07G26520 I 0.786
MTR_3g010660 Medicago truncatula MTR_3g010660 I 0.786
BGIOSGA026419 Oryza indica BGIOSGA026419 I 0.786
F775_31964 Aegilops tauschii F775_31964 I 0.786
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I 0.786
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I 0.786
GRMZM2G077124 Zea mays GRMZM2G077124 I 0.786
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.786
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.786
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I 0.786
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.786
OS07G0686100 Oryza sativa OS07G0686100 I 0.786
Carubv10018770m.g Capsella rubella Carubv10018770m.g I 0.786
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.786
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.786
Sb02g043620 Sorghum bicolor Sb02g043620 I 0.786
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I 0.786
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I 0.786
OMERI07G23410 Oryza meridionalis OMERI07G23410 I 0.786
OMERI03G14020 Oryza meridionalis OMERI03G14020 I 0.786
BGIOSGA010835 Oryza indica BGIOSGA010835 I 0.786
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I 0.786
OBART07G26790 Oryza barthii OBART07G26790 I 0.786
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.786
Pm016826 Prunus mume Pm016826 I 0.786
OB07G32300 Oryza brachyantha OB07G32300 I 0.786
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I 0.786
Cla013878 Citrullus lanatus Cla013878 I 0.786
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I 0.786
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.786
ONIVA03G16560 Oryza nivara ONIVA03G16560 I 0.786
Bo7g067030 Brassica oleracea Bo7g067030 N 0.785
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I 0.785
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I 0.785
F775_28711 Aegilops tauschii F775_28711 I 0.785
MDP0000215106 Malus domestica MDP0000215106 I 0.785
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.785
Ca_08143 Cicer arietinum Ca_08143 I 0.785
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.785
TCM_033824 Theobroma cacao TCM_033824 I 0.785
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I 0.785
OS03G0322700 Oryza sativa OS03G0322700 I 0.785
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I 0.785
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I 0.785
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I 0.785
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I 0.785
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I 0.785
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.785
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.785
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I 0.785
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.785
TRIUR3_12792 Triticum urartu TRIUR3_12792 I 0.785
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I 0.785
TRIUR3_06726 Triticum urartu TRIUR3_06726 I 0.785
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I 0.785
30226.m002055 Ricinus communis 30226.m002055 I 0.784
Si022639m.g Setaria italica Si022639m.g I 0.784
OB01G43630 Oryza brachyantha OB01G43630 I 0.784
OMERI01G32080 Oryza meridionalis OMERI01G32080 I 0.783
BGIOSGA000613 Oryza indica BGIOSGA000613 I 0.783
ONIVA01G39770 Oryza nivara ONIVA01G39770 I 0.783
OLONG_002030 Oryza longistaminata OLONG_002030 I 0.783
mgf002556m Mimulus guttatus mgf002556m I 0.783
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I 0.783
OBART01G34790 Oryza barthii OBART01G34790 I 0.783
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I 0.783
OS01G0813100 Oryza sativa OS01G0813100 I 0.783
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.782