POPTR_0002s09140 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0002s09140 T066931_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.786 0.596
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.786 0.596
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.786 0.596
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.784 0.654
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.784 0.654
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.784 0.654
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.784 0.654
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.784 0.654
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s09140.1 bZIP 247 298

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.793
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.791
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.791
OBART01G37980 Oryza barthii OBART01G37980 I 0.791
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.791
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.791
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.791
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.791
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.791
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.791
Si001731m.g Setaria italica Si001731m.g I 0.791
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.791
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.791
F775_32479 Aegilops tauschii F775_32479 I 0.791
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I 0.789
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.789
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I 0.789
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.789
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.789
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.789
OB01G46760 Oryza brachyantha OB01G46760 I 0.789
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.789
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.789
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.789
OS01G0859300 Oryza sativa OS01G0859300 I 0.789
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.789
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.789
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.788
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.788
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.788
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.788
SapurV1A.0331s0170 Salix purpurea SapurV1A.0331s0170 N 0.787
Si022639m.g Setaria italica Si022639m.g I 0.786
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.786
ABF4 Arabidopsis thaliana AT3G19290 D 0.786
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.786
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.786
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.785
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.785
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.785
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.784
TCM_044596 Theobroma cacao TCM_044596 I 0.784
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.784
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.784
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.784
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.784
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.784
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.784
DPBF3 Arabidopsis thaliana AT3G56850 D 0.784
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.784
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.784
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.784
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.784
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.784
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.784
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.784
MDP0000273211 Malus domestica MDP0000273211 I 0.784
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.784
Eucgr.H00931 Eucalyptus grandis Eucgr.H00931 N 0.783
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I 0.783
mgf011003m Mimulus guttatus mgf011003m I 0.783
Ca_00791 Cicer arietinum Ca_00791 I 0.783
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.783
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.783
OBART05G21000 Oryza barthii OBART05G21000 I 0.783
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.783
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.783
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.783
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.783
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.783
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.783
GLYMA19G37910 Glycine max GLYMA19G37910 I 0.783
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.783
OB05G28440 Oryza brachyantha OB05G28440 I 0.783
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.783
OS05G0489700 Oryza sativa OS05G0489700 I 0.783
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.783
GRMZM2G077124 Zea mays GRMZM2G077124 I 0.782
Sb02g043620 Sorghum bicolor Sb02g043620 I 0.782
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.782
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.782
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.782
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I 0.782
AMTR_s00010p00229220 Amborella trichopoda AMTR_s00010p00229220 N 0.782
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.782
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.782
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.782
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.782
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I 0.782
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.782
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.782
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.782
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.782
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.782
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.782