CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0006s02670
(
Populus trichocarpa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
POPTR_0006s02670
T066963_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.799
0.830
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s02670.1
bZIP
193
245
KTVERKQKRMIKNRESAARSRARRQAYTHELEIKVSHLEEENERLRKQEKAEK
Links
Other
bZIP
family TFs
Other
Populus trichocarpa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0016s02460
Populus trichocarpa
POPTR_0016s02460
I
0.820
SapurV1A.0362s0080
Salix purpurea
SapurV1A.0362s0080
I
0.820
SapurV1A.2287s0010
Salix purpurea
SapurV1A.2287s0010
I
0.820
MTR_6g026800
Medicago truncatula
MTR_6g026800
I
0.809
Eucgr.A02171
Eucalyptus grandis
Eucgr.A02171
I
0.808
Ca_19689
Cicer arietinum
Ca_19689
I
0.808
GSMUA_Achr10G00420_001
Musa acuminata
GSMUA_Achr10G00420_001
I
0.808
PK24205.1
Cannabis sativa
PK24205.1
D
0.799
SapurV1A.0295s0150
Salix purpurea
SapurV1A.0295s0150
I
0.798
Lus10043386.g
Linum usitatissimum
Lus10043386.g
I
0.794
BRADI2G55550
Brachypodium distachyon
BRADI2G55550
I
0.789
Bo6g072380
Brassica oleracea
Bo6g072380
I
0.783
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
0.783
Bo8g091160
Brassica oleracea
Bo8g091160
I
0.783
Bra003253
Brassica rapa
Bra003253
I
0.783
Bo4g112690
Brassica oleracea
Bo4g112690
I
0.783
Bra014668
Brassica rapa
Bra014668
I
0.783
Bra007276
Brassica rapa
Bra007276
I
0.783
Bra007274
Brassica rapa
Bra007274
I
0.783
BRADI2G21820
Brachypodium distachyon
BRADI2G21820
I
0.783