POPTR_0006s02670 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0006s02670 T066963_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN

NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.799 0.830
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s02670.1 bZIP 193 245

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0016s02460 Populus trichocarpa POPTR_0016s02460 I 0.820
SapurV1A.0362s0080 Salix purpurea SapurV1A.0362s0080 I 0.820
SapurV1A.2287s0010 Salix purpurea SapurV1A.2287s0010 I 0.820
MTR_6g026800 Medicago truncatula MTR_6g026800 I 0.809
Eucgr.A02171 Eucalyptus grandis Eucgr.A02171 I 0.808
Ca_19689 Cicer arietinum Ca_19689 I 0.808
GSMUA_Achr10G00420_001 Musa acuminata GSMUA_Achr10G00420_001 I 0.808
PK24205.1 Cannabis sativa PK24205.1 D 0.799
SapurV1A.0295s0150 Salix purpurea SapurV1A.0295s0150 I 0.798
Lus10043386.g Linum usitatissimum Lus10043386.g I 0.794
BRADI2G55550 Brachypodium distachyon BRADI2G55550 I 0.789
Bo6g072380 Brassica oleracea Bo6g072380 I 0.783
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.783
Bo8g091160 Brassica oleracea Bo8g091160 I 0.783
Bra003253 Brassica rapa Bra003253 I 0.783
Bo4g112690 Brassica oleracea Bo4g112690 I 0.783
Bra014668 Brassica rapa Bra014668 I 0.783
Bra007276 Brassica rapa Bra007276 I 0.783
Bra007274 Brassica rapa Bra007274 I 0.783
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.783