POPTR_0008s11260 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0008s11260 T066979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.846 0.806
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.846 0.806
OS02G0266800
M10046_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.790 0.484
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.787 0.677
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.787 0.677
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s11260.1 bZIP 82 143

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.894
30138.m003866 Ricinus communis 30138.m003866 I 0.894
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.894
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.894
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.894
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.892
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.891
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.888
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.880
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.880
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.879
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.874
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.874
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.874
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.874
Cla020641 Citrullus lanatus Cla020641 I 0.869
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.869
Cla005975 Citrullus lanatus Cla005975 I 0.869
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.869
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.866
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.866
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.860
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.860
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.860
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.860
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.860
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.860
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.860
Pm015434 Prunus mume Pm015434 I 0.860
MDP0000863909 Malus domestica MDP0000863909 I 0.851
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.851
MDP0000891108 Malus domestica MDP0000891108 I 0.850
MDP0000183562 Malus domestica MDP0000183562 I 0.850
mgf017392m Mimulus guttatus mgf017392m I 0.846
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.846
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.846
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.845
Cla016748 Citrullus lanatus Cla016748 I 0.844
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.844
Bra023540 Brassica rapa Bra023540 I 0.837
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.837
Bo9g163740 Brassica oleracea Bo9g163740 I 0.836
Bra008670 Brassica rapa Bra008670 I 0.836
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.836
mgf003466m Mimulus guttatus mgf003466m I 0.828
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.827
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.827
Bo2g012800 Brassica oleracea Bo2g012800 I 0.827
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.827
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.827
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.827
Bo3g010620 Brassica oleracea Bo3g010620 I 0.827
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.825
Cla008074 Citrullus lanatus Cla008074 I 0.825
Ca_15971 Cicer arietinum Ca_15971 N 0.825
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.825
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.825
Pm002353 Prunus mume Pm002353 I 0.825
30131.m007078 Ricinus communis 30131.m007078 I 0.825
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.825
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.825
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.825
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.825
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.825
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.825
Bo3g010750 Brassica oleracea Bo3g010750 I 0.825
Bra006324 Brassica rapa Bra006324 I 0.825
TCM_000835 Theobroma cacao TCM_000835 I 0.824
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.824
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.823
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.822
MDP0000891899 Malus domestica MDP0000891899 I 0.821
mgf021986m Mimulus guttatus mgf021986m I 0.820
Ca_09362 Cicer arietinum Ca_09362 I 0.820
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.819
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.818
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.818
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.816
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.813
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.813
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.813
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.813
PK07533.1 Cannabis sativa PK07533.1 I 0.812
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.812
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.812
Si019897m.g Setaria italica Si019897m.g I 0.811
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.811
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.811
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.809
MDP0000239026 Malus domestica MDP0000239026 I 0.808
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.808
Ca_17416 Cicer arietinum Ca_17416 I 0.808
Cla016841 Citrullus lanatus Cla016841 I 0.807
MDP0000738631 Malus domestica MDP0000738631 I 0.807
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.807
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.807
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.806
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.806
MDP0000205823 Malus domestica MDP0000205823 I 0.804
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.804
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.804
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.803
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.802
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.802
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.801
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.801
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.801
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.799
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.798
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.798
MDP0000261154 Malus domestica MDP0000261154 N 0.797
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.796
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.796
28976.m000155 Ricinus communis 28976.m000155 N 0.796
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.796
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.795
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.795
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.795
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.795
mgf018581m Mimulus guttatus mgf018581m I 0.793
Bra020620 Brassica rapa Bra020620 I 0.792
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.792
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.792
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I 0.792
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.792
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.792
mgf007535m Mimulus guttatus mgf007535m I 0.791
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.791
mgf013074m Mimulus guttatus mgf013074m I 0.791
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.791
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.790
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.790
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.790
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.790
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.790
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.790
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.790
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.790
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.790
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.790
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.790
OS02G0175100 Oryza sativa OS02G0175100 I 0.790
Si017778m.g Setaria italica Si017778m.g I 0.790
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.790
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I 0.790
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.790
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.790
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.790
OBART02G05680 Oryza barthii OBART02G05680 I 0.790
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.790
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.790
OS02G0266800 Oryza sativa OS02G0266800 D 0.790
OBART02G11580 Oryza barthii OBART02G11580 I 0.790
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.790
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.789
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.789
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.789
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.788
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.788
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.788
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.788
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.788
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.787
Bra010010 Brassica rapa Bra010010 I 0.787
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.787
OBART02G31030 Oryza barthii OBART02G31030 I 0.787
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.787
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.787
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.787
OS02G0728001 Oryza sativa OS02G0728001 D 0.787
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.787
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.787
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.787
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.787
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.787
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.786
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.786
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.784
PK01815.1 Cannabis sativa PK01815.1 N 0.783
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.782
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.782
Cucsa.374400 Cucumis sativus Cucsa.374400 N 0.782