POPTR_0008s11260 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0008s11260 T066979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.846 0.806
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.846 0.806
OS02G0266800
M10046_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.790 0.484
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.787 0.677
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.787 0.677
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s11260.1 bZIP 82 143

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_04223 Aegilops tauschii F775_04223 I 0.000
F775_43210 Aegilops tauschii F775_43210 I 0.000
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.000
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.000
OBART01G45740 Oryza barthii OBART01G45740 N 0.000
OBART09G00850 Oryza barthii OBART09G00850 N 0.000
OB01G55160 Oryza brachyantha OB01G55160 N 0.000
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.000
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.000
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.000
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.000
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.000
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.000
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.000
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.000
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.000
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.000
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.000
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.000
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.000
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.000
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.000
OS09G0116800 Oryza sativa OS09G0116800 N 0.000
OS01G0975800 Oryza sativa OS01G0975800 N 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000