CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s00680
(
Populus trichocarpa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
POPTR_0010s00680
T066990_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HYH
M01132_2.00
Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN
PBM
Lambert et al.(2019)
pTH9959
0.790
0.859
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s00680.1
bZIP
141
212
DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQEINTKLEEKISTLTNENTMLRKVLMNTRPKVDE
Links
Other
bZIP
family TFs
Other
Populus trichocarpa
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy