POPTR_0016s03590 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0016s03590 T067011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA

TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.805 0.980
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA

TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.805 0.960
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN

NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.805 0.960
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN

NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.805 0.960
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN

NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.805 0.960
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN

NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.805 0.960
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD

HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.805 0.960
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH

DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.805 0.960
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN

NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.805 0.960
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN

NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.805 0.960
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN

NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.805 0.960
HBP1B_WHEAT
M10043_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.805 0.960
TGA2
M09917_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.805 0.960
TGA2
M09918_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.805 0.960
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN

NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.790 0.900
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC

GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.790 0.900
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD

HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.790 0.900
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s03590.1 bZIP 175 224

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ABI4 Arabidopsis lyrata Al_scaffold_0004_2621 I 0.000
ABI4 Vitis vinifera VIT_13s0067g01400 I 0.000
abi4 Zea mays GRMZM2G093595 D 0.000
ABI4 Oryza sativa OS05G0351200 I 0.000
ABI4 Arabidopsis thaliana AT2G40220 I 0.000
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.000
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.000
Bo3g034810 Brassica oleracea Bo3g034810 I 0.000
Bo4g025410 Brassica oleracea Bo4g025410 I 0.000
Bostr.23794s0036 Boechera stricta Bostr.23794s0036 I 0.000
Bra000178 Brassica rapa Bra000178 I 0.000
Bra004978 Brassica rapa Bra004978 I 0.000
Cagra.7053s0005 Capsella grandiflora Cagra.7053s0005 I 0.000
Carubv10025253m.g Capsella rubella Carubv10025253m.g I 0.000
cassava20838.m1 Manihot esculenta cassava20838.m1 I 0.000
cassava41265.m1 Manihot esculenta cassava41265.m1 I 0.000
Ca_12465 Cicer arietinum Ca_12465 I 0.000
chr2.CM0002.60.nc Lotus japonicus chr2.CM0002.60.nc I 0.000
Ciclev10033578m.g Citrus clementina Ciclev10033578m.g I 0.000
Cla006708 Citrullus lanatus Cla006708 I 0.000
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.000
gene21003-v1.0-hybrid Fragaria vesca gene21003-v1.0-hybrid I 0.000
GLYMA02G43240 Glycine max GLYMA02G43240 I 0.000
GLYMA14G06290 Glycine max GLYMA14G06290 I 0.000
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.000
GSMUA_Achr3G10100_001 Musa acuminata GSMUA_Achr3G10100_001 I 0.000
GSMUA_Achr5G07400_001 Musa acuminata GSMUA_Achr5G07400_001 I 0.000
GSMUA_Achr9G18060_001 Musa acuminata GSMUA_Achr9G18060_001 I 0.000
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.000
Lus10009834.g Linum usitatissimum Lus10009834.g I 0.000
Lus10040944.g Linum usitatissimum Lus10040944.g I 0.000
MDP0000225376 Malus domestica MDP0000225376 I 0.000
MDP0000628484 Malus domestica MDP0000628484 I 0.000
mgf024416m Mimulus guttatus mgf024416m I 0.000
MTR_5g082950 Medicago truncatula MTR_5g082950 I 0.000
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.000
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.000
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.000
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.000
orange1.1g038194m.g Citrus sinensis orange1.1g038194m.g I 0.000
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.000
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.000
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.000
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.000
PGSC0003DMG400034739 Solanum tuberosum PGSC0003DMG400034739 I 0.000
PGSC0003DMG400041883 Solanum tuberosum PGSC0003DMG400041883 I 0.000
Pm018953 Prunus mume Pm018953 I 0.000
POPTR_0008s07120 Populus trichocarpa POPTR_0008s07120 I 0.000
POPTR_0010s19370 Populus trichocarpa POPTR_0010s19370 I 0.000
PRUPE_ppa015230mg Prunus persica PRUPE_ppa015230mg I 0.000
SapurV1A.0061s0480 Salix purpurea SapurV1A.0061s0480 I 0.000
SapurV1A.0650s0090 Salix purpurea SapurV1A.0650s0090 I 0.000
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.000
SELMODRAFT_420500 Selaginella moellendorffii SELMODRAFT_420500 I 0.000
SELMODRAFT_427925 Selaginella moellendorffii SELMODRAFT_427925 I 0.000
TCM_042471 Theobroma cacao TCM_042471 I 0.000
Thhalv10017614m.g Eutrema salsugineum Thhalv10017614m.g I 0.000