POPTR_0019s15040 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0019s15040 T067018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN

NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.846 0.968
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN

NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846 0.968
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH

DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832 0.903
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN

NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832 0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN

NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831 0.968
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD

HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831 0.968
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN

NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831 0.968
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s15040.1 bZIP 175 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
bigmax Drosophila melanogaster FBgn0039509 D 0.000
GA17397 Drosophila pseudoobscura FBgn0077410 I 0.000
GF18714 Drosophila ananassae FBgn0095731 I 0.000
GG12119 Drosophila erecta FBgn0104411 I 0.000
GH23834 Drosophila grimshawi FBgn0131291 I 0.000
GI24571 Drosophila mojavensis FBgn0147293 I 0.000
GM10111 Drosophila sechellia FBgn0165062 I 0.000
GD15127 Drosophila simulans FBgn0186798 I 0.000
GJ22637 Drosophila virilis FBgn0209741 I 0.000
GK11114 Drosophila willistoni FBgn0213125 I 0.000
GE10568 Drosophila yakuba FBgn0228424 I 0.000