POPTR_0019s15040 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0019s15040 T067018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN

NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.846 0.968
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN

NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846 0.968
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH

DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832 0.903
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN

NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832 0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN

NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831 0.968
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD

HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831 0.968
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN

NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831 0.968
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s15040.1 bZIP 175 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13027_YKL185W Saccharomyces mikatae 13027_YKL185W I 0.000
14038_YKL185W Saccharomyces bayanus 14038_YKL185W I 0.000
14176_YKL185W Saccharomyces paradoxus 14176_YKL185W I 0.000
AACERI_AaceriAER088C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER088C I 0.000
AGOS_AER088C Ashbya gossypii AGOS_AER088C I 0.000
ASH1 Saccharomyces cerevisiae YKL185W D 0.000
BN7_5349 Wickerhamomyces ciferrii BN7_5349 I 0.000
CAGL0D00462g Candida glabrata CAGL0D00462g I 0.000
CANTEDRAFT_134124 Candida tenuis CANTEDRAFT_134124 I 0.000
CaO19.12803 Candida albicans CaO19.12803 I 0.000
CaO19.5343 Candida albicans CaO19.5343 I 0.000
CD36_24700 Candida dubliniensis CD36_24700 I 0.000
CLUG_00208 Candida lusitaniae CLUG_00208 I 0.000
CLUG_00208 Clavispora lusitaniae CLUG_00208 I 0.000
CORT_0C07060 Candida orthopsilosis CORT_0C07060 I 0.000
CPAG_02467 Candida parapsilosis CPAG_02467 I 0.000
CTRG_02051 Candida tropicalis CTRG_02051 I 0.000
DEHA2F03190g Debaryomyces hansenii DEHA2F03190g I 0.000
Ecym_3236 Eremothecium cymbalariae Ecym_3236 I 0.000
estExt_fgenesh1_pm.C_chr_7.10092 Pichia stipitis estExt_fgenesh1_pm.C_chr_7.10092 I 0.000
G210_5831 Candida maltosa G210_5831 I 0.000
GNLVRS01_PISO0F02579g Millerozyma farinosa GNLVRS01_PISO0F02579g I 0.000
GNLVRS01_PISO0J02539g Millerozyma farinosa GNLVRS01_PISO0J02539g I 0.000
HPODL_01599 Ogataea parapolymorpha HPODL_01599 I 0.000
KAFR_0G03380 Kazachstania africana KAFR_0G03380 I 0.000
KLTH0D15136g Kluyveromyces thermotolerans KLTH0D15136g I 0.000
KLTH0D15136g Lachancea thermotolerans KLTH0D15136g I 0.000
Kpol_1055p57 Vanderwaltozyma polyspora Kpol_1055p57 I 0.000
KUCA_T00000158001 Kuraishia capsulata KUCA_T00000158001 I 0.000
Kwal_4069 Kluyveromyces waltii Kwal_4069 I 0.000
LELG_02325 Lodderomyces elongisporus LELG_02325 I 0.000
NCAS_0A02650 Naumovozyma castellii NCAS_0A02650 I 0.000
NDAI_0D04580 Naumovozyma dairenensis NDAI_0D04580 I 0.000
PAS_chr3_0418 Komagataella pastoris PAS_chr3_0418 I 0.000
PGUG_02221 Meyerozyma guilliermondii PGUG_02221 I 0.000
PGUG_02221 Candida guilliermondii PGUG_02221 I 0.000
PICST_66069 Scheffersomyces stipitis PICST_66069 I 0.000
SKUD_184402 Saccharomyces kudriavzevii SKUD_184402 I 0.000
SPAPADRAFT_70705 Spathaspora passalidarum SPAPADRAFT_70705 I 0.000
SU7_1926 Saccharomyces arboricola SU7_1926 I 0.000
TBLA_0F01250 Tetrapisispora blattae TBLA_0F01250 I 0.000
TDEL_0E00870 Torulaspora delbrueckii TDEL_0E00870 I 0.000
XP_002492646.1 Pichia pastoris XP_002492646.1 I 0.000
YALI0_E16577g Yarrowia lipolytica YALI0_E16577g I 0.000
ZBAI_02699 Zygosaccharomyces bailii ZBAI_02699 I 0.000
ZBAI_08946 Zygosaccharomyces bailii ZBAI_08946 I 0.000
ZYRO0B13134g Zygosaccharomyces rouxii ZYRO0B13134g I 0.000