Solyc04g054320.2 (Solanum lycopersicum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Solyc04g054320.2 T068208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1A
M02662_2.00 		Nicotiana sp.
TGACGTD
HACGTCA		 SELEX
Mathelier et al.(2014)
MA0129.1 		0.783 0.843
TGA1A_TOBAC
M10081_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2_01 		0.783 0.843
TGA1A_TOBAC
M10082_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2 		0.783 0.843
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g054320.2.1 bZIP 82 132

Links

Other bZIP family TFs
Other Solanum lycopersicum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400012792 Solanum tuberosum PGSC0003DMG400012792 I 0.794
PGSC0003DMG400006345 Solanum tuberosum PGSC0003DMG400006345 I 0.785
VIT_07s0031g01320 Vitis vinifera VIT_07s0031g01320 I 0.785
Solyc04g011670.2 Solanum lycopersicum Solyc04g011670.2 I 0.785
Ca_12670 Cicer arietinum Ca_12670 N 0.784
Gorai.007G243200 Gossypium raimondii Gorai.007G243200 I 0.784
TGA1A Nicotiana sp. TGA1A_TOBAC D 0.783
TGA1A_TOBAC Nicotiana tabacum TGA1A_TOBAC D 0.783